KEGG   Rhodoferax ferrireducens: Rfer_2918
Entry
Rfer_2918         CDS       T00334                                 
Name
(GenBank) Penicillin-binding protein 1A
  KO
K05366  penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
Organism
rfr  Rhodoferax ferrireducens
Pathway
rfr00550  Peptidoglycan biosynthesis
rfr01100  Metabolic pathways
rfr01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:rfr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Rfer_2918
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Rfer_2918
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:rfr01003]
    Rfer_2918
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rfr01011]
    Rfer_2918
Enzymes [BR:rfr01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     Rfer_2918
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Rfer_2918
Glycosyltransferases [BR:rfr01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   Rfer_2918
Peptidoglycan biosynthesis and degradation proteins [BR:rfr01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   Rfer_2918
SSDB
Motif
Pfam: Transgly Transpeptidase PCB_OB
Other DBs
NCBI-ProteinID: ABD70629
UniProt: Q21UC4
Position
complement(3227411..3229804)
AA seq 797 aa
MPSKSPASETSPSHQANSGATAVQWLLRIVLWAGGLLLAGILSILIIVAIAMAVAFPNLP
DISDLSDYRPKLPLRVYSVEGVLIGEFGEERRHLTPIKEIPKVMTDAVLAIEDARFYEHS
GIDYKGVLRAALANLGRIKSQGASTITMQVARNVYLSTEKTYTRKIYEMLLTFKLEHLLT
KDQILEIYMNQIFLGNRAYGFAAASEAYFDKPLKDISIAEAAMLAGLPKAPSAYNPISNP
RRAKARQLHIIDRMLENGFITEEQALTARQEKLTVKSSAEHAKVHAEYAAETVRQLMFAQ
YGNETYTRGLNVYTTLRAADQEAAYKSLRRGIMDFERRQIYRGPEEFVSLPSDPQELEDA
IDEALGEHPDDGDVMSALVLGADAKKITAVRLNGETVEITGEGLKPAQSGLSDKAPPNIK
IRRGAVIRVTKTPKNTWEITQLPEVEGAFVALDPRNGAIKALVGGFDFQKNKFNHVTQAW
RQPGSSFKPFIYSAALEKGFTPATIINDAPIFFSAGVTGGQPWEPKNYDGKFEGPMTMRR
GLAKSKNMISIRILQAVGAQNAQDWITRFGFEADKHPAYLTMALGAGSVTPLQMASAYSV
FANGGYRINPWLISKVTEQKGKVLLETKSPVLDESMRAIDARNAFIMDSLLQEVTRTGTA
ASAQAILKRPDLYGKTGTTNDSVDAWFAGFQPTLAAVSWIGYDTPRNLGARETGGGLSLP
IWIRFMQQALANVPVTEPSVPEGVVNSGGEWFYNEYANKAGVTSVGLDEPSGMQGGNQVI
ELPPADERKKILDLFRN
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgccctccaaatcacccgctagcgagaccagcccatcccaccaagccaactctggcgca
actgccgtgcagtggctgctgcgcatcgtgctatgggccggtggtctgctattggccggc
atattgtcaattctgatcatcgttgccattgcgatggcagtggcgtttccaaatctaccc
gacatttcggatttgtctgattaccgccccaaattgccgttgcgtgtgtattccgtcgaa
ggtgttttgattggggagtttggcgaggagcgccgacacctgacaccgatcaaggaaatc
cccaaggtcatgacggatgcggtgctggccattgaggatgcacgtttttacgaacacagc
ggcatcgattacaagggcgtattgcgcgcggcgctggccaacctggggcgcatcaagagc
cagggcgcctccaccattaccatgcaggtggcacgcaacgtttatctgtcaaccgaaaaa
acctatacccgcaagatttatgagatgttgctgaccttcaagttggagcatttattgacc
aaggatcagattcttgaaatctacatgaatcagatttttctgggtaatcgtgcctatggc
tttgccgctgcgtctgaggcctattttgacaagccgctgaaagacatctccattgcagaa
gcggccatgttggccggattacccaaggcgccatcggcctacaacccgatcagcaacccc
aggcgagccaaggcgcggcagttgcatatcattgatcgtatgctggaaaacggcttcatc
acggaagaacaggcgctgaccgccagacaggaaaagctcaccgtgaagtccagtgcagag
cacgccaaagtgcacgccgagtacgcggccgagaccgtacgtcagttgatgttcgcgcag
tatggcaatgagacttacacccgtggcctgaacgtgtacaccactttgcgcgcggccgac
caggaggcagcctacaagtctttgcggcggggcatcatggattttgagcggcgccagatt
taccgggggccggaggaattcgtctcgctgccgtccgatccgcaggaacttgaggacgcc
attgacgaggctttgggtgagcaccctgatgacggcgacgtgatgtcggccctggtgctg
ggtgcagacgccaagaagatcactgcggtacgcctgaacggagaaaccgttgaaattacc
ggcgaaggcctcaagccggctcaatcaggcctgtcggacaaagcgccacccaacatcaag
attcggcgcggcgccgtgattcgggtgaccaagacgccaaaaaatacctgggaaatcacg
caattgccggaggtggaaggtgcgtttgtggcgctggatccgcgcaatggcgccatcaag
gccttggtcggcggttttgatttccagaagaataaatttaaccatgtgacgcaagcctgg
cgtcaaccgggttccagtttcaagccttttatctactccgctgccctcgaaaaaggcttt
accccggcgaccatcatcaacgatgccccaatcttttttagcgccggtgtgaccggaggg
cagccttgggagcccaaaaattatgatggcaaatttgaaggtcccatgacgatgcgccgg
gggctggccaagtccaagaacatgatctctatccgcatcctgcaagcggtgggtgcacaa
aatgcgcaggactggatcacgcgctttggtttcgaagccgacaagcaccccgcctacctc
accatggccttgggtgccggctccgtcacgcccctgcaaatggcttcggcctattcggtc
tttgccaacggcggctaccgcatcaatccgtggctgatcagcaaagtgaccgaacagaaa
ggaaaagtcctgctggaaaccaagtcaccggtgctcgacgagtcgatgcgtgccattgat
gcgcgcaacgctttcatcatggacagtctgttgcaggaagtgacccgcaccggcacggcg
gcctccgcccaggcgatcttgaagcgccctgacttgtacggcaaaaccggcaccaccaat
gattcggtggatgcctggtttgcgggattccagcccacgctggctgccgtcagctggatt
ggctatgacacgccgcgcaatcttggcgcgcgtgaaacgggtggcggcttgagcctgccg
atctggatccggttcatgcagcaggcgctcgccaatgtccctgtgacagaaccgagcgtt
ccggagggcgttgttaattcaggtggcgaatggttttacaacgagtatgccaacaaggcg
ggtgtcaccagtgtcgggctcgatgagccctcagggatgcaaggtggcaaccaggtgatt
gagttgccacccgccgatgaacgaaagaaaattctggatttgttcaggaattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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