KEGG   Rhodococcus sp. B7740: NY08_810
Entry
NY08_810          CDS       T03776                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
rhb  Rhodococcus sp. B7740
Pathway
rhb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rhb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NY08_810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhb03400]
    NY08_810
DNA repair and recombination proteins [BR:rhb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NY08_810
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NY08_810
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 AAA_5 DUF87 AAA_19 AAA_16 AAA_7 UvrD-helicase Helicase_RecD P-loop_SecA AIG1 nSTAND3 UB2H DUF6716 ZapA
Other DBs
NCBI-ProteinID: AJW38840
UniProt: A0A0D5A7F1
Position
830532..832643
AA seq 703 aa
MGAIERTGPAFEVVSEHVPAGDQPTAIAELERRIKADEKDVVLLGATGTGKSATTAWLIE
KLQRPTLVMAPNKTLAAQLANELRDMLPNNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSS
INDDVERLRHSATASLLSRRDVVVVASVSCIYGLGTPQSYVDRSIELEVNVEVQRDALLR
LLVDVQYTRNDMAFTRGSFRVRGDTVEIIPSYEELAIRIEFFGDEIEALYYLHPLTGDIV
RQVDSVRIFPATHYVAGPERMERAVKDIEAELEDRLAELESKGKLLEAQRLRMRTQYDLE
MIKQVGFCSGIENYSRHIDGRGAGTAPATLIDYFPEDFLLVIDESHVTVPQIGAMYEGDM
SRKRNLVDFGFRLPSATDNRPLTWEEFTQRIGQTVYLSATPGKYELGQTGGEFVEQVIRP
TGLVDPKVVIKPTKGQIDDLVHQIRERAEKDERVLVTTLTKKMSEDLTDYLLELGIRVRY
LHSDIDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSGTSL
IQTIGRAARNVSGEVHMYADKMTDSMTYAIEETERRREKQIAYNKERGVDPQPLRKKIAD
ILDQVYQEAEDTESVVEVGGSGRNASRGRRAQGEAGRSVSTGVYEGQDVSSMPRAELADL
IKNMTDQMMNAARELKFELAGRLRDEIQDLKKELRGMDAAGLK
NT seq 2112 nt   +upstreamnt  +downstreamnt
gtgggcgcaatagagcgcaccggaccggcgttcgaggtcgtcagcgaacacgtaccggcg
ggcgatcagccgaccgccatcgccgagctcgaacggcggatcaaggcggacgagaaggac
gtcgtcctgctcggtgccaccggtaccggcaaatcggccaccaccgcctggctcatcgag
aagctgcagcgcccgaccctggtgatggcaccgaacaagacgctggcggcgcagttggcg
aacgagctgcgagacatgttgcccaacaacgcagtcgagtacttcgtctcgtactacgac
tactaccagcccgaggcgtacatcgcgcagaccgacacctacatcgagaaggactcgtcc
atcaacgacgatgtcgaacgtctgcggcactcggcgacggcatcgctgctctcgcgccga
gacgtggtcgtggtggcgtcggtgtcgtgcatctacggtctcggcaccccgcagtcgtac
gtcgatcggtcgatcgagctggaggtcaacgtcgaagtgcagcgtgacgcgctgctccgg
ctgctggtggacgtgcagtacacccgcaacgacatggccttcacccgcggatcgttccgg
gtccgcggcgacaccgtcgagatcattccgtcctacgaggaactcgcgattcgaattgag
ttcttcggtgacgagatcgaagcgctgtactacctgcatccgctcaccggcgacatcgtt
cggcaggtggattcggtgcgcatcttcccggccacgcactacgtcgccggtccggagcga
atggaacgagccgtcaaggacatcgaggccgaactcgaagatcggctcgccgagctggag
agcaaaggaaaactgctcgaggctcagcggctgcggatgcggacgcaatacgacctggag
atgatcaagcaggtcgggttctgctctggtatcgagaactactcgcggcacatcgacggc
cgtggtgcaggcaccgcacccgcgacactgatcgactactttcccgaggacttcctactg
gtcatcgacgagtcccacgtgacggtgccgcagatcggagccatgtacgagggcgatatg
tcgcgcaagcgcaatctcgtcgacttcgggttccgcttgccgtccgcgaccgacaaccga
ccgttgacgtgggaggagttcacccagcgcatcggtcagacggtctacctctcggcaact
ccgggaaagtacgagctgggccagaccgggggagagttcgtcgagcaggtgattcgtccc
accggactcgtcgaccccaaggtcgtcatcaaaccgaccaaggggcagatcgacgacctg
gtccatcagatccgggaacgcgcggagaaggacgagcgtgtgctggtgaccacgctgacc
aagaagatgtcggaggatctgaccgactacttgctcgagctgggcattcgtgtccgctac
ctgcactctgacatcgacacgctgcgccgcgtcgaactgcttcggcaactcaggttgggc
gagtacgacgtactggtgggcatcaacctgctccgtgagggtctcgacctacccgaagtc
tcgttggtggcaattctcgacgccgacaaggaaggcttccttcgcagcggcaccagtctc
attcagaccatcggccgtgccgcgcgaaacgtctccggtgaagtccatatgtacgccgac
aagatgaccgattcgatgacctacgccatcgaggaaaccgagcgtcgacgcgagaagcag
atcgcgtacaacaaggagcgaggcgtcgatccgcagccgctgcgcaagaagatcgccgac
atcctcgaccaggtgtaccaggaggccgaggacaccgagtccgtcgtcgaggtcggtgga
tccggtcgcaacgccagccgcggacggcgagcacagggcgaggcgggaaggtcggtcagc
accggtgtgtacgagggtcaggacgtgtcgtcgatgccccgcgccgagctggccgatctg
atcaagaacatgaccgatcagatgatgaacgcggcacgtgagctcaagttcgagctcgcc
ggccggctgcgcgacgagatccaggatctgaagaaggagctccgaggcatggacgcggcc
ggcctcaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system