KEGG   Sinorhizobium fredii NGR234: NGR_a04130
Entry
NGR_a04130        CDS       T00888                                 
Symbol
trbF
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NGR_a04130 (trbF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhi02044]
    NGR_a04130 (trbF)
Secretion system [BR:rhi02044]
 Type IV secretion system
  Trb secretion system protein
   NGR_a04130 (trbF)
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: AAB92436
UniProt: P55403
Position
pNGR234a:complement(527891..528553)
AA seq 220 aa
MAANRAPENPYLAARQEWTERYGSYVRAAAAWRTVGILGLAMAVIGFGYAMYLSTEVKLV
PYIVQVDKLGTSVTTGFPEQIEYADVRVVRATLGNFVTSFRSITPDAAVQKQYIDRTYVL
LRTSDPSTEKINAWFRGNSPFEKAKTATVAIEVNNIVALSNQTYQIDWTEYERDRKGKEI
GTRRFRGIATVTLTAPQDEATIRLNPIGLYVRDFDWTAQL
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagcgaaccgcgcccccgaaaacccctatcttgccgcgcggcaggaatggacggaa
cgatacggatcctatgtgcgagccgccgcggcatggcgcacagtcggcattctgggcctg
gccatggccgtgatcggtttcggatatgctatgtatctcagcaccgaggtcaagctcgtg
ccttacatcgtccaggtcgacaagcttggcacgtcggtcacgaccggtttccccgaacag
attgaatatgcggatgtgcgggtagtgcgcgccacgctcggcaatttcgtgaccagcttc
cgttcgatcacgccggacgccgcggtgcagaaacaatatatcgaccgcacctacgtgctc
cttcggacctccgatccgtcgacggagaagatcaacgcctggttccgaggcaattcgcca
ttcgagaaggcaaaaaccgcaacggtcgcgatcgaagtcaacaacatcgtggcgctctca
aaccagacctatcagatcgactggaccgaatacgaacgggaccgcaagggcaaggagatc
ggcacgcgccggttccggggcatcgcgacggtgacactcaccgcgccgcaggacgaggca
accatccgcctcaatccaatcggcctttatgtcagggattttgactggacagcgcagctt
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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