KEGG   Sinorhizobium fredii NGR234: NGR_b10250
Entry
NGR_b10250        CDS       T00888                                 
Symbol
virB1
Name
(GenBank) VirB1 type IV secretion protein
  KO
K03194  type IV secretion system protein VirB1
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NGR_b10250 (virB1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhi02044]
    NGR_b10250 (virB1)
Secretion system [BR:rhi02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   NGR_b10250 (virB1)
SSDB
Motif
Pfam: SLT DUF2188
Other DBs
NCBI-ProteinID: ACP22478
UniProt: C3KQX0
Position
pNGR234b:990745..991359
AA seq 204 aa
MAADFVELAEKCAPEIGLETLAAVVSLESGFHPFAIRINSGAPLGEQPATKAEAIEAATA
LVAAQQDVQLGLGAIGSSELARLRLTLADAFDPCLNLKATATLLTGYYRQAIRAGRASQE
ADRVMLQAFFGRGDASVGAIVRYDEQVRREVERLSGKLTSADATPVEDAVVLPKPADERP
WNVFASGRSVSVLVFRNDEEEQHR
NT seq 615 nt   +upstreamnt  +downstreamnt
atggccgccgactttgtcgaacttgctgaaaagtgcgctccggagattgggctcgaaaca
cttgccgcagttgtcagtctggaaagcggttttcaccctttcgcaatccggatcaacagc
ggggcgccgcttggtgaacagcctgcaaccaaggcagaagcgatcgaagccgcaacagcc
cttgtagccgcgcagcaagacgtccagctcggtcttggcgctatcgggtcgagcgaactc
gcaaggcttcgtctcactctcgccgacgccttcgatccatgcctgaacctcaaggcaacc
gcgacattgctgaccggctactacaggcaggccattcgtgccgggagggcgtcgcaagaa
gcggaccgcgtgatgctgcaggcctttttcgggcggggcgatgcttcggtcggcgcgatc
gtcagatacgacgaacaggtccgccgtgaagtcgaaaggctttccggcaaactgacctcc
gcggacgcaacacccgtagaagatgccgtcgtcctcccgaagcctgcagacgagcggccg
tggaatgtctttgcctcagggcggagcgtgtccgttcttgtctttcgaaatgatgaagag
gagcaacaccgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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