KEGG   Rhizobium sp. N1341: AMJ98_PD00418
Entry
AMJ98_PD00418     CDS       T04420                                 
Name
(GenBank) DNA polymerase III subunit epsilon protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rhn  Rhizobium sp. N1341
Pathway
rhn03030  DNA replication
rhn03430  Mismatch repair
rhn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rhn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AMJ98_PD00418
   03430 Mismatch repair
    AMJ98_PD00418
   03440 Homologous recombination
    AMJ98_PD00418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhn03032]
    AMJ98_PD00418
   03400 DNA repair and recombination proteins [BR:rhn03400]
    AMJ98_PD00418
Enzymes [BR:rhn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AMJ98_PD00418
DNA replication proteins [BR:rhn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AMJ98_PD00418
DNA repair and recombination proteins [BR:rhn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AMJ98_PD00418
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: ANL13175
Position
pRspN1341d:complement(449200..450126)
AA seq 308 aa
MAEARGPSRRRPSPPAPPSDEDMARALEESGNYRILRKLAARPVAAARQPGFSRLGVILD
TETTGLSHRSDEIIEIGAVAFTFNDDGAVGDVVGIYGGLQQPSRPIPPDITRLTGITDAM
VDGQLIDMPSLSALIEPADLIIAHNAGFDRPFCEAFSPIFAGKAWACSVSEIDWSARGFE
GTKLGYLVGQAGYFHDGHRAVDDCHALLEILDRERGDGESPFAELYRASQRCRIRIFAEH
SPFEMKDHLKARGYRWSDGSDGRLKSWWIEVGEDDLGDELSYLRSEIYRWKEADPPIVRL
TAFDRFKA
NT seq 927 nt   +upstreamnt  +downstreamnt
atggccgaagcacggggcccatcgcgccggcggccgtcaccgccggcgcccccctccgat
gaagacatggcgcgggcgctggaggagagcggcaattatcgcatcctgaggaaactcgcc
gcccggccggtcgcggcagcgagacagccgggtttctcgcggctcggcgtcatcctcgac
acggagacgacgggcctcagccaccgcagcgacgagatcatcgaaatcggcgccgtcgcc
ttcaccttcaacgatgacggcgcggtcggcgatgtggtcggcatctatggcggcctgcag
cagccctccaggccgatcccgcccgacatcaccaggctgaccgggattaccgacgccatg
gtcgacggacaactcatcgacatgccgtcgctgagtgccctgatcgaaccggcggacctc
atcattgcccacaatgccgggttcgaccggccgttctgcgaggccttctcgcccatcttc
gccggcaaggcctgggcgtgctcggtttcggagatcgactggagcgcccgcggtttcgag
ggcacgaagctcggttatctcgtcggccaagccggttatttccacgatggccaccgcgcg
gtggacgattgccacgcgctcctggagattctcgatcgcgagcgaggcgacggtgaaagc
cccttcgccgagctttaccgcgccagccaacgctgccgcatccgcatctttgccgaacac
agcccgttcgagatgaaggatcacctgaaggcaagaggctaccgctggtctgatggaagc
gatggccgcctgaaatcctggtggatcgaagtgggcgaagacgatctcggggacgagctt
tcctatctgcgttcggaaatctaccggtggaaggaggccgatccgccgatcgtccggctg
acggccttcgatcgcttcaaggcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system