KEGG   Rhodococcus fascians PBTS 2: A3Q41_04297
Entry
A3Q41_04297       CDS       T05030                                 
Symbol
murD_2
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
rhs  Rhodococcus fascians PBTS 2
Pathway
rhs00470  D-Amino acid metabolism
rhs00550  Peptidoglycan biosynthesis
rhs01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rhs00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    A3Q41_04297 (murD_2)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    A3Q41_04297 (murD_2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rhs01011]
    A3Q41_04297 (murD_2)
Enzymes [BR:rhs01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     A3Q41_04297 (murD_2)
Peptidoglycan biosynthesis and degradation proteins [BR:rhs01011]
 Precursor biosynthesis
  Amino acid ligase
   A3Q41_04297 (murD_2)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C MurD-like_N AlaDh_PNT_C ADH_zinc_N
Other DBs
NCBI-ProteinID: AMY25573
UniProt: A0A143QQX7
Position
complement(4513974..4515434)
AA seq 486 aa
MTEASTDLSWLRGSSVLVTGARISGLAVVRPLLDLGALVTVTDSNRAALDEASALGAAVV
VQDDLLADPDAIAAFALVVTSPGFRPDSPVLAAAADHDVPVWGDVEFSWHLDRAEVYGPR
ARWLVVTGTNGKTTTTSMLASILDAAGIDSFACGNIGLPIADALRGTPHPRVLAVELSSF
QLFWAPSVRPAAGVVLNIAEDHLDWHGGMDGYVQAKARALSGDVAVVGLDDAVAAGLRAG
APAETVVGFRLDEPAAGELGVRAGMLVDRAFGDDVELLRADEVEPSGPSGVLDALAAAAL
ARSIGVDAEAVRNGLRTYRVGPHRAAVVRELGGVTFVDDSKATNPHAARSSILAHDRVVW
IAGGLLKGAVIDDLVVEIADRLVAAVVLGRDGMQIAEALARHAPDVPVVRLPSGDDAGVT
HEAEDADAVMRAAVDHAAGFAASGDTVLLAPAAASLDMFVDYGHRGRSFAESVERLDIAA
LGSPRS
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgaccgaagcctcgaccgatctgtcctggttgcgcggtagttcggtgctggtcaccggt
gcgcgcatctccgggctggccgtcgtacgcccactactggacctcggcgcactcgtgacc
gtcaccgactcgaaccgagctgcgctcgacgaggcgtcggcgctcggtgctgccgtggtg
gttcaggacgatctgctcgccgatccggacgcgatcgcggcctttgcgctcgtcgtcacc
agtcccgggttccggccggactctccggtgctggctgcggccgccgaccacgacgtcccg
gtgtggggcgacgtggagttctcgtggcatctcgaccgcgccgaggtgtacggcccgcgc
gctcgttggctggttgtcaccggtacgaacggtaagacgaccaccacctcgatgctcgcc
tcgatcctcgacgctgccggaatcgactccttcgcctgcggaaacatcggcctccccatc
gccgacgcattgcgcggtaccccacatccccgcgtgctcgcggtcgagctgtcgtccttc
cagctgttctgggcgccgtcggttcgtcccgcggcgggggtggtgctcaacatcgccgag
gatcacctggactggcacgggggcatggacgggtacgtccaggccaaggcgcgcgcgttg
agcggggacgtcgctgtcgtgggactcgacgacgcggtggcggccggtctgcgggcgggg
gcacctgctgagacggtcgtcggtttccgcctggacgaacccgccgcgggcgagttggga
gtgcgggcgggaatgctcgtcgatcgtgcgttcggggacgacgtcgagttgctccgggcc
gacgaggtggaaccgagtggcccgtccggtgtgctcgacgcgttggccgcggctgcgttg
gcgcgatcgatcggtgtcgacgccgaggccgtccgaaacggattgcggacgtaccgggtg
ggaccgcatagggccgcagtggtgcgtgagctcggtggggtgacgttcgtcgacgattcc
aaggcgacgaatccgcatgccgcgcgttcgtcgatcctcgcgcacgatcgggtcgtgtgg
atcgcgggcggtttgttgaagggtgcggtgatcgacgatctggtcgtcgagatcgccgat
cggctcgtggctgcggtggtgttgggccgcgatgggatgcagatcgcagaggctttggcg
cgacacgcccccgatgttccggtcgtcaggctcccttcgggagacgatgctggtgtgact
catgaggctgaagatgcagatgcggtgatgcgagcggccgtcgaccacgctgcggggttc
gccgcctccggcgataccgtcctgctggcccccgcggctgcgtcgttggacatgttcgtc
gattacggtcaccgcggccgaagcttcgccgagtccgtcgagcgcctcgacatcgccgcc
ctcggatcgccgcgatcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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