KEGG   Rhodococcus sp. PBTS 1: A3Q40_03310
Entry
A3Q40_03310       CDS       T05182                                 
Symbol
gabD1
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] 1
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
rhu  Rhodococcus sp. PBTS 1
Pathway
rhu00250  Alanine, aspartate and glutamate metabolism
rhu00310  Lysine degradation
rhu00350  Tyrosine metabolism
rhu00650  Butanoate metabolism
rhu00760  Nicotinate and nicotinamide metabolism
rhu01100  Metabolic pathways
rhu01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:rhu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    A3Q40_03310 (gabD1)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    A3Q40_03310 (gabD1)
   00310 Lysine degradation
    A3Q40_03310 (gabD1)
   00350 Tyrosine metabolism
    A3Q40_03310 (gabD1)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    A3Q40_03310 (gabD1)
Enzymes [BR:rhu01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     A3Q40_03310 (gabD1)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     A3Q40_03310 (gabD1)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     A3Q40_03310 (gabD1)
SSDB
Motif
Pfam: Aldedh baeRF_family2 DUF4880
Other DBs
NCBI-ProteinID: AMY20671
UniProt: A0A143QCU0
Position
3549796..3551172
AA seq 458 aa
MTTYKTVNPADGTTVKEFETLDGAGVERALADAHAGFQTWRKTSPKHRADILHKVADLYT
ERSDELARTISLEMGKPLTESQGEVELSSNIYRYYADHGPSLLEDEKLDVPGAEDTVLQR
KPVGALVGVMPWNFPYYQVARFAGPNLMVGNTILLKHAPNCPQSALLMEEIFQQAGLPQD
AYINIFATNDQIADMIADSRVQGVSLTGSERAGTSVAETAGRNLKKVVLELGGSDVFILL
DSDDMDATVESATRARLSNAGQACNAAKRILVAEEVYDDFVTKLVASFEAVQTGDPLDAK
TTLGPLSSQTAADTLIEQIDDAVAKGATLLTGGKKIDGPGAYVQPTLLTDVTPDMRAYSE
ELFGPAGVIYKVESAQQAIELANSSAYGLSGSVWSADLDKARDVAEQLEVGMAFVNEHGT
TLPGLPFGGVKRSGVGRELGPWGMDEFVNKKLVRVSAK
NT seq 1377 nt   +upstreamnt  +downstreamnt
gtgacgacctacaagactgtcaatcctgccgacggcacaacggtgaaggaattcgagact
ctcgacggtgccggcgtcgagcgtgcacttgccgatgcacacgccggtttccagacatgg
cgcaagacctcaccgaagcatcgcgccgacatcctgcacaaggtcgccgatctctacacc
gagcgttccgacgaactggcccgcacgatctcgctcgaaatgggcaagcccctcaccgaa
tcccagggcgaggtggaactgtcgtcgaacatctaccgctactacgccgaccacggcccg
tcgcttctcgaggacgagaagctcgacgtacccggcgcggaagacactgtgctgcagcgt
aagccggtgggcgctctcgtcggcgtcatgccgtggaacttcccgtactaccaggttgcc
cggttcgccggcccgaacctgatggtgggcaacacgattctgctcaagcatgcacccaat
tgcccgcagtcggcactgctgatggaggagatcttccagcaggccggactcccccaggac
gcgtacatcaacatcttcgcgaccaacgaccagatcgccgacatgatcgccgactcccgc
gtccagggcgtctcgctcaccggtagtgaaagggccggaacctccgtcgccgagacggcc
ggacgcaacctcaagaaggtcgtcctcgaacttggcggatcggacgtattcatcctgctc
gactccgacgacatggacgccaccgtcgaatccgctacccgggcgcggctgtccaacgca
ggccaggcctgcaatgccgccaagcgcatcctggtcgccgaggaggtctacgacgacttc
gtcaccaagctcgtcgcgtcgttcgaagccgtgcagaccggcgacccgctggacgcgaag
accaccctcggacccctgtcgtcgcagaccgccgccgacacgctgatcgagcagatcgac
gacgccgtcgccaagggcgcaacgctgctgaccggcggtaaaaagatcgacggaccgggt
gcctacgtacagccgacattgctgaccgacgtcaccccggacatgcgcgcctatagcgaa
gagctgttcggaccggccggcgtgatctacaaggtcgaaagcgcgcagcaggcaatcgaa
ttggcgaactcctccgcatacggtctcagcggctcggtgtggagcgctgacctcgacaag
gcccgcgacgtggccgagcagctcgaagtgggcatggcgttcgtcaacgaacacggcacc
acgctgccaggtctgccgttcggcggagtcaagcgctccggcgtcggccgcgaactgggc
ccgtggggcatggacgagttcgtgaacaagaagctcgtgcgcgtctcagcgaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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