KEGG   Candidatus Riesia pediculicola: RIEPE_0388
Entry
RIEPE_0388        CDS       T01218                                 
Symbol
priA
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
rip  Candidatus Riesia pediculicola
Pathway
rip03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RIEPE_0388 (priA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rip03400]
    RIEPE_0388 (priA)
Enzymes [BR:rip01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RIEPE_0388 (priA)
DNA repair and recombination proteins [BR:rip03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RIEPE_0388 (priA)
SSDB
Motif
Pfam: DEAD ResIII PriA_C Helicase_C PriA_CRR AAA_19 AAA_30
Other DBs
NCBI-ProteinID: ADD79461
UniProt: D4G8H6
Position
complement(382080..383669)
AA seq 529 aa
MEQSRIIERILEDKKFIPWLLVGITGSGKTEVYLRLIENTLILGKQTLMLVPEISLTPQT
TKRFNERFNVPIEVLHSSLNNREKFFIWERSKNGENAIVIGTRSALFTNFKDLGLIIVDE
EHDNSYKQQNGWCYHARNMAIWRAKKEKIPIIMGTATPSLESLFNVEIGKYRRIDLTKRP
KGILPSHYVHDLKGKPLICNLSRSLIQNIKYHISQNNQVMLFLNRRGYSPILICHKCGYV
SECLRCDHYYTLHRNKKKIECHYCNQQLPIPIQCSNCSSNRLISLGFGTEKLEEKIRQIF
PNIPVSRIDKDTIKNTKLLQQKLSLIREKKARILIGTQMLAKGHHFPNVTLVALMDIDGV
FFSNDYRASEKFAQLFTQVSGRAGRSEKKGEVILQTYHPKHPVLSSLLRKGYNEFALEIL
KERKEFLLPPYSNHVIIRSEDLQGSFSLIFLKKVKKIILKHTKDKRLYLSDPIPSVKPKK
RGLFRWLLLIQHDSKSFLNFLLSNLTQKIQKVPERKQVRWNIDVDPIEH
NT seq 1590 nt   +upstreamnt  +downstreamnt
ttggaacaatcaagaatcatcgaaaggattttagaagataaaaagtttattccttggtta
ttggttggaattactggatctggaaagacagaagtatatctgagattaatagaaaacaca
ctaattttggggaaacaaaccctaatgttagtcccagagattagtttgacacctcaaact
acaaaaagattcaatgaaagatttaatgttccaattgaagtattgcactcatcattaaac
aatcgagaaaagtttttcatttgggaaagatctaaaaatggagaaaatgccattgtgatt
ggaacgagatctgcattgtttacaaattttaaagatttagggttaatcatagtagacgaa
gaacatgataattcatataagcagcaaaatggatggtgttatcatgcaagaaatatggct
atttggagagccaaaaaagagaaaattccaatcattatgggaactgccactccatcttta
gaaagtttatttaatgttgaaataggaaaatatagaagaatagatttaactaagagacct
aaaggaattttgccttcacattacgttcatgatttgaaaggaaaacctctgatatgcaat
ttatctcgttcattgattcaaaatattaaatatcacatttctcaaaataatcaagtcatg
ctttttttaaatcgaagaggatattctccaatattgatttgtcacaaatgtggatatgtt
tcggaatgtttaaggtgtgatcattattacacattacatcgaaataaaaaaaaaatagaa
tgccactattgcaatcaacaacttccgataccaatacagtgcagtaattgtagttctaat
cgtttgatttcattaggttttggaactgaaaaattagaagaaaaaatacgtcaaattttt
ccaaacataccagtttcgcgaattgacaaagatacaataaaaaatacaaaacttctacaa
cagaaactctctctgataagagaaaaaaaagcaagaattttaattggaacacaaatgcta
gctaaaggacatcattttccaaatgttacattagtagctttaatggatatcgatggtgta
tttttttctaacgattatagagcttcagaaaaattcgcccagctattcactcaagtatct
ggaagagcgggaagatctgaaaagaaaggagaagtgatactacaaacctatcatccgaaa
catccagtattatcttctttattaagaaaaggatataatgaatttgctttagaaatctta
aaagaaagaaaagaatttcttttaccaccttatagcaatcatgtaattattcgatcagaa
gatcttcaaggatcattttctttaatttttttaaagaaagttaagaagatcatcttaaaa
catactaaagataaaagattgtatttaagcgatccaataccctctgtaaaaccgaaaaaa
aggggattgtttcgatggctactcctcatacaacacgattctaaaagctttttgaacttt
ttactatctaatctaactcaaaaaatccaaaaggttccagaaagaaaacaggttcgttgg
aatattgacgtagatcctatcgaacattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

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