KEGG   Candidatus Riesia pediculicola: RIEPE_0400
Entry
RIEPE_0400        CDS       T01218                                 
Name
(GenBank) DNA polymerase III delta' subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
rip  Candidatus Riesia pediculicola
Pathway
rip03030  DNA replication
rip03430  Mismatch repair
rip03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RIEPE_0400
   03430 Mismatch repair
    RIEPE_0400
   03440 Homologous recombination
    RIEPE_0400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rip03032]
    RIEPE_0400
   03400 DNA repair and recombination proteins [BR:rip03400]
    RIEPE_0400
Enzymes [BR:rip01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RIEPE_0400
DNA replication proteins [BR:rip03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RIEPE_0400
DNA repair and recombination proteins [BR:rip03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RIEPE_0400
SSDB
Motif
Pfam: DNApol3-delta_C DNA_pol3_delta2
Other DBs
NCBI-ProteinID: ADD79773
UniProt: D4G8I8
Position
394244..395236
AA seq 330 aa
MRWYPWLNQDYKKIIRLLSRKKKCLSILFHSNSGLGSDLLIYAISRWMMCRKHFGIMICN
KCRNCRMMLSGVHPDFYRLNTSEKGNSIGVEQIREINKVLHHHSNYNFVRIIWIRNIQYL
TKEARYSLIKTLENFSEKKTYFFLESSQAIFNLSSLRSKCILYSLKEPRNEVVIDWLNEN
YNFPKKNIAIATKLYSGSPLNILNLLEDQRWKNRKKFYFNFGKNVVCRGDLLSFFQEFKK
RSDIEERIFFLVVLFLDVIKYQKDSIFYCINQDEFDLIKCISKKISTKKLLKIVENLEIL
RKNLMRSSFINLDLNIIIQLCNLQICFKES
NT seq 993 nt   +upstreamnt  +downstreamnt
atgagatggtatccctggttaaatcaagattataaaaaaataattagattacttagtcga
aaaaagaaatgtttatctatattatttcactcaaattctggattgggaagcgatctttta
atatatgcaatatctcgatggatgatgtgtagaaaacattttggaattatgatctgtaac
aaatgtagaaattgtagaatgatgctttctggagtgcatccagatttctacagattaaac
acctcagagaaaggaaattctataggagttgaacaaattcgtgaaataaataaagttctg
catcatcatagcaactataactttgttagaataatatggataagaaatatccagtatcta
accaaagaagcgagatattccttaataaaaactttggagaatttttcagaaaaaaaaacc
tatttttttttagaatctagtcaagccatttttaatttatcttctttaagaagtaaatgt
attttatattctttaaaagaacctcgaaatgaagttgtaatagattggttaaatgaaaat
tacaactttccaaaaaaaaatatagcaatagcgaccaaattatactctggatcgcctctg
aatatattaaatcttttggaagatcagagatggaaaaatagaaaaaagttctattttaat
ttcggtaaaaatgtagtttgtagaggtgatcttttaagttttttccaagaatttaagaaa
aggagtgatatcgaagagagaatattttttttagtagttctatttttggacgttataaaa
tatcagaaagattctatcttttactgtatcaatcaagacgaatttgatttgattaaatgt
atcagtaagaaaatttctacgaaaaaattgttaaaaattgttgaaaacttagaaattttg
agaaagaacttaatgagatcttcttttataaatttggatttaaatattattatacaactt
tgtaatttacagatttgttttaaagagagttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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