KEGG   Rivularia sp. PCC 7116: Riv7116_4254
Entry
Riv7116_4254      CDS       T02364                                 
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
riv  Rivularia sp. PCC 7116
Pathway
riv00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:riv00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Riv7116_4254
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:riv01007]
    Riv7116_4254
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:riv03016]
    Riv7116_4254
Enzymes [BR:riv01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     Riv7116_4254
Amino acid related enzymes [BR:riv01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   Riv7116_4254
Transfer RNA biogenesis [BR:riv03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Riv7116_4254
 Prokaryotic type
    Riv7116_4254
SSDB
Motif
Pfam: B3_4 tRNA_synthFbeta FDX-ACB tRNA_bind B5
Other DBs
NCBI-ProteinID: AFY56685
UniProt: K9RFE9
Position
5333566..5336001
AA seq 811 aa
MRISLNWLQELVELRLNPEELAETLTMAGFEVEDIEDRRTWADGVVIGKVVEREQHPNAD
KLSVCQVDVGKGENLNIVCGAANVRADIYVPVATVGTYLPNKDLKIKPAKLRGVPSQGMI
CSLEELGLPTDVDGIHIFSGDNIQIGDDVRPLLGLDDVILDVTATANRADALSMVGIARE
VAAITGGKLKIPDPEKVSVAQNAGSFSIKVDDTKACPAYIGTVIGQVKIAPSPDWLQQRL
LSAGVRPISNIVDITNYVMLEWGQPLHAFDLTRLQSIAASEDISIGVRFANNGENFKTLD
GKSRNLSTQNLLITVNNKPVALAGVMGGEESEVHDGTESLVLEAALFDNVAIRRSSRSVG
LRSESSTRYERGVNHAELEVACNRALSLIVEIAGGTLKAQEISDTRPDSGWTRSIELRLD
RVNQILGPVDLGEEETGEIKGGDVERILTALGCRLTVSGDGTWAVNVPAYRYRDLEREID
LIEEIARLYGYDNLCDTLPEKPEVGYLPTDQELIRKLRAAFRAIGLTELMHYSLVKPGED
RQVVLSNPLFAEYSALRTDLISGLIDAFQYNIEKGNGALNGFEIGKIFWEEEDGFQEADT
VGGIIGGDITSSKWMSGGSQKSISWFEAKGILESVFKVMGLQVEYQPDRRDDRLHPGRTA
SLWVGGNRLGVFGQVHPQIRSEKDLPDDVYVFQLSLEVLLDAVDEDDILTPKFKSFSTYP
PSDRDIAFFAPVDLTVADIEKAINKAGKSLLDSVELFDEYRGENVPEGQRSLAFRLIYRS
PERTLTDADVEPVHQKVRDSLVEKFGVSLRS
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgcgtatttctttaaattggttgcaagagcttgtagagttacgtttaaacccagaagaa
ctagcagaaacactgacaatggcggggtttgaagtagaagatattgaggatcgtcgcact
tgggcagatggtgttgtaatcgggaaagttgtcgaacgagaacaacatccaaatgctgac
aaattaagcgtttgtcaagttgatgtcgggaagggcgaaaatttaaatatcgtctgcggt
gctgctaacgtccgtgcagatatatatgtgcctgttgcaacagtaggtacttacttaccg
aataaagatttgaagattaaacccgctaaattacgcggggtaccttctcaaggaatgatt
tgttctttggaggagttgggtttacctaccgatgtagatggtattcatattttttctggg
gataacatccaaattggtgatgatgtacgtccgctattaggtttggacgatgtgatttta
gatgtaactgctacggcaaaccgtgccgatgcgttgagtatggtggggattgcgcgagag
gtagcagcgataactgggggtaaactaaaaattcccgatccagaaaaagtttctgttgct
caaaatgcgggtagtttcagtatcaaagttgatgatacgaaggcttgtccggcatatatt
ggaacagtgattggacaagttaaaatagctccttctccggactggttgcagcaaagatta
ttgtctgctggagttagaccgattagcaatatagttgatattactaactatgtaatgttg
gaatggggacagccattacacgcatttgacctgacgcgactgcagagtattgctgcgagc
gaggatattagtattggagtaaggtttgcgaataacggggaaaatttcaaaaccctggat
ggaaaaagccgcaatttatcaactcagaatttattaattaccgttaataacaaacccgtt
gctttagcgggggttatgggtggagaagaaagcgaagtccatgacggaacagaaagttta
gttttagaagcagctttatttgataatgttgctattcgccgctcatctcgcagtgttggt
ttgagaagcgaatcttccaccagatacgaacgaggagtaaatcacgccgagttagaagtt
gcttgtaaccgtgctttatccttgatagttgaaattgctggtggcactttaaaagctcaa
gaaatctccgatactcgtcccgattcaggttggactcgttcgattgaactgcgtttagat
agagtaaatcaaatactaggtcctgtagacttaggagaagaagaaactggagaaattaaa
ggcggagatgttgagcggattttaacagctttgggatgtcgtttaactgtttctggtgat
ggtacttgggctgttaacgtacctgcttatcgctatcgcgatttagagcgagaaattgat
ttaatcgaagaaatcgctcgtttatatggttatgacaatctttgcgatactttaccggaa
aagccagaagttggttatctgcctacagatcaagaattaattcgcaagttaagagctgca
ttccgggctatagggttgacggaattaatgcattactccttggttaaaccgggagaagac
aggcaggtggtattgagcaatcccttgtttgcagaatattcagcattacgaactgattta
atatctggtttaattgatgcatttcaatacaatatcgaaaaaggaaacggcgcgcttaac
ggttttgaaatcggcaaaattttctgggaagaagaagacggtttccaggaagcagacacc
gtaggaggaatcatcggaggtgatattacttccagtaagtggatgagcggaggtagtcag
aaatccataagctggtttgaagccaaaggtattttagaaagcgtctttaaagtcatggga
ttgcaggtagaataccagccagatagacgcgacgatcgcctgcatccggggcgtactgct
tcgctttgggtaggaggcaataggttaggtgtatttgggcaagtgcatcctcaaattcgc
agcgaaaaagacttaccggatgatgtttatgtatttcaactaagtttagaagtactttta
gatgcggtagacgaagatgatatactcacacctaaattcaagtcattttctacctatccg
ccatcagatagagatattgcttttttcgcacccgttgacttaacagtagctgacattgaa
aaagctattaataaagccggtaaaagtttattagattccgtcgaattattcgatgaatat
cgcggtgaaaatgtacccgaaggacaaagaagtttagcatttcgcttaatttatcgttcc
ccagagcgtacacttaccgatgctgatgttgaaccagtacatcagaaagttagagatagt
ttggttgagaaatttggggtaagtttaaggagttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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