KEGG   Rivularia sp. PCC 7116: Riv7116_6866
Entry
Riv7116_6866      CDS       T02364                                 
Name
(GenBank) DNA topoisomerase I, bacterial
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
riv  Rivularia sp. PCC 7116
Brite
KEGG Orthology (KO) [BR:riv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:riv03032]
    Riv7116_6866
   03400 DNA repair and recombination proteins [BR:riv03400]
    Riv7116_6866
Enzymes [BR:riv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Riv7116_6866
DNA replication proteins [BR:riv03032]
 Prokaryotic type
  DNA Topoisomerases
   Riv7116_6866
DNA repair and recombination proteins [BR:riv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Riv7116_6866
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4 DUF6429 Toprim_2
Other DBs
NCBI-ProteinID: AFY59180
UniProt: K9RMK9
Position
complement(8646535..8649222)
AA seq 895 aa
MSTLVIVESPTKAKTIRNYLPSDYRVEASMGHVRDLPQSASEIPAAVKGEEWAKLGVNVE
SNFEPLYVVPKTKKQVVSQLKQALKEASELILATDEDREGESISWHLYQLLKPKVPTKRM
VFHEITSEAIKKALKNTRTVDEQLVRAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRLLVQRERERRAFNQGSYWDLKAVLSQTANKGSKEQSFNSVLVSLAGTKLATGSDF
DPATGKIAAGRKVVLLNEEEAEALKARITDKTWKVTNLDERPVTRKPAPPFTTSTLQQES
NRKLRLSARDTMRVAQNLYEQGYITYMRTDSVHLSEQAVTAARECVQKLYGNEFLSPQPR
KYTTKSKSAQEAHEAIRPAGSSFRTPQETGLSGRELQLYDLIWKRTVACQMADAKQTQIT
MHLLVEDAGFRSSGKRIDFPGFLRAYVEGSDDPEAALEDKEVILPNLKVGDNPSCKELQT
VGHETQPPARFTEATLVKTLESEGIGRPSTYASIIGTIVDKGYAQLTNNALIPSFTAFAV
TKLLETHFSEIVDPSFTSKMEQTLDDISTGEAEWLPYLKKFYLGEKGLDTLVKERESQID
INTSRTVDLNIPDVKIRIGKFGAYLEAENGDEVVTASIPRDLTPSDLDPEKVEKLLKQKT
EGPDQVGIHPETAQPIFMLIGPYGPYVQLGEKSEENPKPKQASLPKNVKPEDVTVEMAVG
LLALPRKLGEHPETGASVQANLGRFGPYVVHNAKEGKDYRSLKAGDDVLTVSLERALELL
SQPKKGRGSRSNAKKPLRELGSHPDNEEPVNIYEGPYGVYIKHGKTNVGIPEGETVESIT
LEKALELLANKAPKGKSTRKTTKSKTSSTKKSNSTKSKASSKTSTAKSKKKTETS
NT seq 2688 nt   +upstreamnt  +downstreamnt
atgtcaactctcgttattgtcgaatctccgaccaaagctaaaactattcgtaactattta
ccatcagattatcgagtagaagcttcgatgggtcatgtacgtgacttgccacagtccgct
agtgaaattcccgccgctgtcaaaggagaagaatgggcgaagttgggagtaaacgtagaa
tcaaattttgaaccgttgtacgtagtccccaagaccaaaaaacaggttgtcagccagttg
aaacaagcgcttaaggaagcatccgaactgattttggcgactgacgaagaccgcgaaggt
gaaagtatcagctggcatttgtaccaactgttaaagccaaaagttcctacaaagcgaatg
gtgtttcatgaaattacttctgaagccataaaaaaagccctgaaaaatacccgtacagtt
gatgaacagctagttcgcgctcaagaaacgcgacgaattttagaccgacttgtaggttac
acactttcacctttgttgtggaaaaaaattgcctggggtttgtcggctggaagagtgcag
tctgtagcggtgcgactgttagtgcaacgggaacgggaacgtcgtgcttttaatcaaggt
tcttactgggatttaaaagcggttttgagtcagacagctaataaaggaagtaaagagcaa
tcgtttaattccgtattggttagtttggcaggaaccaagctcgcaactggtagcgatttc
gatccagcaacgggaaaaattgccgcaggtcgtaaagttgtactactcaacgaagaagaa
gccgaagctctgaaagcacggataaccgataaaacttggaaagttaccaatcttgacgaa
cgtccggtaacgcgcaaaccagcgcctccgtttactacttcgaccttacagcaggaatct
aaccgtaagttacgtttatcagcccgcgatacgatgcgagttgctcaaaacctttacgaa
caaggttacataacctacatgcgtaccgactcggtacacttgtcggaacaagcagtaacc
gcagccagagaatgcgtgcaaaagctttacggtaacgaatttttgtctccccagcccaga
aaatacacgacaaaatctaaaagcgcccaagaagcacatgaagctattcgtccggctgga
agcagcttccgcactcctcaagaaaccggtttgagcggtagagaattgcaattgtacgat
ttaatctggaagcgtaccgttgcctgtcaaatggcagatgcaaagcaaactcaaatcacc
atgcatttactagtggaagatgcgggttttcgctcttcaggtaagcgaattgattttccg
ggatttttacgtgcttatgtagaaggttccgacgatcccgaagcagcacttgaagacaag
gaagtcattttacctaacctaaaagttggcgataatcccagctgcaaagaactgcaaact
gtgggtcatgaaactcagcctccagcccgatttacagaagcaactttagtgaaaacccta
gaaagcgaaggcattggtcgtcccagtacctatgccagcattatcggtactattgtcgat
aaaggttacgctcaattaactaataatgctttaattccttcattcacagccttcgctgtg
actaaattgctagaaactcatttctcggaaatcgttgaccccagcttcacctccaaaatg
gagcaaactcttgatgatatttccactggagaagcggaatggttaccttacttaaaaaaa
ttctatttaggagaaaaaggtctcgataccttagttaaggagcgagaaagtcaaattgat
atcaatacatctagaaccgttgacttgaacatccccgatgtcaaaatccgcatcggtaaa
ttcggtgcttatttagaagctgaaaatggcgatgaggtggttacagcctcgattccccga
gatttaactccctccgacctcgatccggaaaaagtagaaaaattactcaagcaaaaaacc
gaaggtcccgaccaagtggggattcatccagaaactgcccagccgattttcatgctgatt
ggtccttacggtccttacgtacaattgggtgaaaagtctgaagaaaatcccaaacccaaa
caagcttcgctacctaaaaatgtcaagccagaagacgtaactgtggaaatggctgttggt
cttttagctttgcccagaaaattaggagaacatccagaaactggtgctagtgttcaagcc
aatttaggtcgttttggaccctacgtagttcacaatgccaaagagggaaaagattaccgt
tcgttgaaagctggtgatgatgtacttacggttagcttagaaagagcattagaattattg
tctcagcctaaaaaaggacggggtagcagaagtaatgctaagaagccattgcgtgaatta
ggttctcacccagacaatgaagaaccagtcaatatttatgaaggaccttacggagtttac
ataaagcatggtaaaaccaatgtcggcattcctgaaggtgaaactgtagaaagcattact
ttagagaaagcattggaattactagcgaacaaagcaccaaaaggtaaatctactcgcaaa
acaaccaagtcaaaaacttcaagtactaaaaaatcgaatagtactaaatctaaagcttct
agcaaaacttctactgctaaatctaagaagaaaacagaaacaagctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (38)   

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