KEGG   Roseburia intestinalis XB6B4: RO1_01540
Entry
RO1_01540         CDS       T02597                                 
Name
(GenBank) recombination protein RecR
  KO
K06187  recombination protein RecR
Organism
rix  Roseburia intestinalis XB6B4
Pathway
rix03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rix00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RO1_01540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rix03400]
    RO1_01540
DNA repair and recombination proteins [BR:rix03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     RO1_01540
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      RO1_01540
SSDB
Motif
Pfam: Toprim_4 RecR_HhH Toprim RecR_C RecR_ZnF HHH_5 HHH Prok-RING_4 Urocanase Menin HHH_8 DZR IMS_HHH zf-RING_5
Other DBs
NCBI-ProteinID: CBL10980
UniProt: D4KUE0
Position
139233..139829
AA seq 198 aa
MDYYSSQISKLIQELSSLPGIGAKSAQRLAFHILNMPVEQVEELSSAIVDARKNVRYCKE
CFTLTDDELCPICKDAGRNHKTIMVVEDTRDLAAYEKTGKYDGVYHVLHGAISPMLGIGP
ADIKLKELMQRLQKDVDEVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGDL
EYIDEVTLLRALEGRTEI
NT seq 597 nt   +upstreamnt  +downstreamnt
atggattattacagcagtcagatcagtaaattaatacaggaattatcgtctcttccggga
atcggtgcaaaatctgcacagcgtctggcatttcatattttgaatatgccggtggaacag
gtcgaagaactttcgtctgcgatcgtggatgcaaggaaaaatgtccgttactgtaaggaa
tgttttaccctgacagatgatgaactgtgtccgatctgtaaggatgccggacgtaaccac
aagacgattatggttgtggaagataccagagatcttgcagcatatgaaaaaaccggcaaa
tacgacggggtttatcatgtcctgcatggggcaatttctccgatgcttggaatcggacct
gcagatatcaagttaaaagagctgatgcagcgcctgcaaaaggatgttgacgaggtgatc
attgcgacaaactcaagccttgagggagaaacgacggcgatgtatatcagcaaactgatc
aaacctaccgggatcaaagtgacaaggatcgcaagtggtgttccggtcggcggagattta
gagtatattgatgaggtaacactgctccgtgccttagaaggcagaacggagatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (22)   

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