KEGG   Rickettsia japonica: RJP_0634
Entry
RJP_0634          CDS       T01637                                 
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
rja  Rickettsia japonica
Pathway
rja03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RJP_0634 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rja03400]
    RJP_0634 (uvrC)
DNA repair and recombination proteins [BR:rja03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RJP_0634 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH_2 DHO_dh DUF5588 Menorin
Other DBs
NCBI-ProteinID: BAK96839
UniProt: G4KNI1
Position
complement(819451..821370)
AA seq 639 aa
MTLEITGTELIKSKLIDAPERSGVYRMFDVNKQVIYVGKAKNLKKRLTNYIKSNLDNKTL
RMIANTCFLEYSITNSEVEALLLEAQLIKKFQPKFNILLKDYKSFPFIKLRLDHNFPQLL
KYRGKILSDGKFFGPFASSAEVNTTLTELQKIFKLRSCTDNYFNSRTRPCLQYEIKRCYA
PCVGKINKEDYRDLVTQVKDFLQGRTKELQENLSRKMAELSSQMRFEEAAEIRDRIKALS
YVQLKAGVSDVVKDADIIAIVDKNGHYCVEVFLYREGQACGNIPYFLTSTENSTKEEVLE
YFLLQFYQKQHVPAAIIINHEINDKENVIEAIKKINNILQLNITVPNKGGKAKLVQNAET
NALFSLEQYLKKFAKNQEIMFEIKELFGLSEIPERIEIYDNSHIQGKFAVGVMVVASKVG
FDKKEYRVFNVHAPSLVCHSRESGDPKRLMDSCFRGNGIKNCRGDIKGDDYEMFRQVLTR
RFTRLRQEPHKLPSLMIIDGGKGHLGVVKEVMDKFEMNIPFVCMSKGVDRNAGFEQFHVI
GKEVFTLDKNLPVMKYLQILRDEAHNFAIKNHRLGRSRAIKISSLDDIEGIGETRKKALL
HYFGSYKAVCDATIDELAKVNGINKLLAEIIFNALHRKN
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgaccctagaaattaccggaactgagttaattaaatctaaacttatagatgctcctgaa
cgttcaggggtttatcgaatgtttgatgttaacaagcaagttatctatgttggtaaagct
aaaaatttaaagaaacgccttactaattacattaaaagcaatttagataataagacgctt
cggatgattgcaaatacttgttttttagagtatagcatcactaattccgaagttgaagca
ctacttttagaagcacagctaatcaagaaatttcagccgaaatttaatattcttcttaag
gactacaagtcttttcctttcattaagttacgtttagatcataatttcccacaattacta
aaatatcgaggtaaaattctaagtgacgggaagttttttggtccttttgcctcgagtgcg
gaagttaatactactttgaccgaactacaaaaaatttttaaattacgttcctgcacggat
aattactttaattcacgtactcgcccttgcttacaatatgaaataaaacgttgttatgct
ccttgcgtcggtaaaataaacaaggaagactatagagacttagtaactcaggttaaagat
ttcttacaaggtcgcactaaagaactccaagagaacctatctagaaagatggcagagcta
agtagtcagatgcgttttgaagaagcggcagaaattagagatcgcattaaagcacttagt
tatgtgcagcttaaggcaggggtttcagatgtcgttaaagacgcagatataatcgctatt
gtggacaagaacgggcattattgcgtggaagtgtttttatatagggaagggcaagcatgc
ggtaatattccttattttcttacttctaccgaaaatagtaccaaagaagaagtattagaa
tattttttattacaattttaccaaaaacaacacgtgcctgcggcaattataattaatcat
gaaattaatgataaagagaatgtgatagaggcgattaagaaaatcaacaatatacttcag
cttaatattacagtacctaataaaggcggtaaggctaaattagttcaaaatgccgagaca
aatgctttattttctctagagcagtatttgaagaaatttgcaaaaaatcaagagattatg
tttgaaattaaagagctatttggtctttctgaaattcctgaaagaattgagatttatgat
aatagccatattcaaggtaagtttgcggttggagtgatggtagttgctagtaaagtcggt
tttgataaaaaagaatatcgggtttttaatgtccatgctccctctctcgtatgtcattcc
cgtgaaagcggggatccaaaaaggttaatggattcctgctttcgcgggaatggcataaag
aactgcaggggtgacataaaaggtgacgattatgagatgttccggcaagtcctaacaagg
cggtttacaaggttaaggcaagagccgcataaattgccaagcttaatgattatagacggc
ggcaaagggcatttaggcgtcgttaaagaggtgatggataaatttgaaatgaatattcct
tttgtttgtatgtcaaaaggagtagatagaaatgccggttttgaacagttccatgtgata
ggtaaggaagtatttactctagataagaatttgccggttatgaaatatttacaaatcttg
cgagatgaggcacataattttgccataaagaatcatagactaggtagatcacgtgctata
aaaatatcaagccttgacgatatagagggcataggtgaaactcgaaaaaaagcattactg
cattatttcggttcgtataaagcagtatgcgacgcaaccatagatgagcttgctaaagta
aatggcattaacaagttacttgctgagataatttttaatgctttgcacagaaaaaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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