KEGG   Rhodoluna lacicola: Rhola_00004620
Entry
Rhola_00004620    CDS       T03203                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
rla  Rhodoluna lacicola
Pathway
rla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Rhola_00004620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rla03019]
    Rhola_00004620
   03016 Transfer RNA biogenesis [BR:rla03016]
    Rhola_00004620
Enzymes [BR:rla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Rhola_00004620
Messenger RNA biogenesis [BR:rla03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Rhola_00004620
Transfer RNA biogenesis [BR:rla03016]
 Prokaryotic type
  tRNA degradation factors
   Rhola_00004620
SSDB
Motif
Pfam: RNase_PH PNPase S1 KH_1 RNase_PH_C KH_2 KhpA-B_KH DUF4254
Other DBs
NCBI-ProteinID: AIC47281
UniProt: A0A060JBN1
Position
473715..475937
AA seq 740 aa
MEGPEIKATEAVIDNGKFGKRVIRFETGRLAQQAQGAAAVYIDEETMLFSATTASKQPKD
QFDFFPLTIDVEERMYAAGRIPGSFFRREGRPSTEAILACRLIDRPLRPSFVDGLRNEIQ
VVVTVWAIEPDEMYDVVAINAASMSTQLAGLPFSGPIGGVRVALIDGQWVGFPKHSQLER
AVFNMVVAGRVIVENGVEDVAIMMVEAEASENAMDLIAAGAKAPSEEVVSEGLEAAKPFI
KALVKAQADLAAVAAKPTADYPTFLPYTDEVFAAVESSAGAELAKVYQIADKVERQDADD
ALKAATKEKLEAQLSEEQMAQFSAAYKSVTKKIMRTRVLKENIRIDGRGLRDIRTLDAEV
AVIPRVHGSAIFQRGETQILGITTLNMLKMEQQIDSLSPVTSKRYMHNYNFPPYSTGEVG
RVGTPKRREIGHGALAERALVPVLPKREDFPYAIRQVSEALGSNGSTSMGSVCASTLALL
NAGVPLRAPVAGIAMGLISDTVDGKVQYAAITDILGAEDALGDMDFKVAGTRDFITAIQL
DTKLDGIPASVLAGALTQAKEARLTILDVMAQAISEPDEMAPTAPRVIAVKIPVDKIGEV
IGPKGKMINQIQEDTGADISIEDDGTVYIGATDGPSAEAAKAAVNAIANPHVPEIGERFL
GTVVKLATFGAFVSLVPGKDGLLHISELKKMAGKRVENVEDVLEVGQKLQVEITKIDDRG
KLSLAPVVEGDAAASDSDEE
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggaaggtccagaaatcaaagcaacagaagccgttatcgataacggcaaattcggtaag
cgtgttattcgcttcgaaaccggtcgactagctcagcaggcacagggtgcggctgcggtt
tacatcgacgaagagaccatgctgttctcggctaccactgcaagcaagcagccaaaagat
cagttcgacttcttcccactaactatcgacgttgaagagcgcatgtatgcagctggtcga
attccaggcagcttcttccgtcgcgagggtcgtccatcaactgaggcaattcttgcttgt
cgtttgatcgaccgtccactacgcccatcattcgttgatggtcttcgcaacgaaattcag
gttgtagttaccgtttgggcaattgagcctgacgaaatgtatgacgtagttgcaatcaac
gcagcttcaatgtcaactcagcttgctggtctgccattctctggtcctatcggtggtgtg
cgcgttgcacttatcgacggtcagtgggttggtttccctaagcactctcagctagagcgc
gcagtattcaacatggttgttgctggtcgcgtaatcgttgagaacggcgtcgaagacgtt
gcaatcatgatggttgaagctgaagcatctgaaaacgcaatggacctaatcgctgctggt
gcaaaggctccttcagaagaagttgtctcagagggtctagaggctgcaaagccattcatc
aaggctttggttaaagctcaggccgacctggctgcagttgctgcaaagccaactgctgac
tacccaaccttcttgccatacaccgatgaagttttcgctgcggttgagtcatcagctggt
gcggaacttgcaaaggtttaccagattgctgacaaggttgagcgtcaggatgccgacgat
gcactgaaggctgcaaccaaagagaagttggaagctcagctttcagaagagcagatggct
cagttctctgctgcttacaagtcagtaaccaagaagattatgcgtactcgcgtgctgaag
gaaaacatccgtatcgatggccgtggtcttcgtgacattcgtacccttgatgcagaagtt
gcagttattcctcgcgttcacggttcagcaatcttccagcgcggtgagacccagattctt
ggtatcaccaccttgaacatgttgaagatggaacagcagattgactcactgagcccagtg
acgtcaaagcgctacatgcacaactacaacttcccgccttactcaacaggtgaagttggc
cgcgtgggtactccaaagcgtcgcgagattggtcacggtgctcttgctgagcgcgcgttg
gttccagttctgccaaagcgcgaggacttcccatacgcaatacgtcaggtatctgaggct
cttggttcaaacggttcaacctctatgggttctgtttgtgcttcgactcttgcacttcta
aacgctggtgtgccacttcgcgctccggtagcaggtattgcaatgggtctgatctctgac
accgttgatggcaaggttcagtacgcagcaatcaccgatatccttggcgccgaagatgca
cttggcgacatggacttcaaggttgccggtactcgcgacttcatcacagcgattcagcta
gacaccaagcttgacggtattcctgcatcagttcttgctggcgcacttacccaggctaag
gaagcacgtctaaccattcttgacgtaatggcacaggcaatttctgagccagacgagatg
gctcctactgctcctcgcgttatcgcggtgaagattccagttgacaagatcggtgaagtc
attggtccaaagggcaagatgattaaccagatccaggaagacactggcgctgacatctct
atcgaagacgacggtaccgtttacattggtgcaaccgatggcccatcagcagaagctgct
aaggctgcggttaacgcaattgcaaacccacacgtccctgagattggcgagcgtttccta
ggaaccgttgtgaagctagctacctttggtgctttcgtttcactagttccgggcaaggac
ggtctactacacatctctgaactaaagaagatggctggcaagcgcgttgagaatgttgaa
gacgttcttgaggttggccagaagctacaggttgagatcaccaagatcgatgaccgcgga
aagctttcactagccccggttgttgagggtgatgcagccgcatcagattcagacgaagag
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (38)   

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