KEGG   Rhodoluna lacicola: Rhola_00009060
Entry
Rhola_00009060    CDS       T03203                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rla  Rhodoluna lacicola
Pathway
rla03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rhola_00009060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rla03400]
    Rhola_00009060
Enzymes [BR:rla01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Rhola_00009060
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rhola_00009060
DNA repair and recombination proteins [BR:rla03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Rhola_00009060
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N OrfB_Zn_ribbon Auto_anti-p27 Glyco_transf_20 DZR
Other DBs
NCBI-ProteinID: AIC47708
UniProt: A0A060JMB4
Position
complement(925794..926723)
AA seq 309 aa
MPELPEVETVRAGLAPALTNATVIGVDVLDSRSLKRHPGGVVDFQQTMVGAKVLGVVRRG
KFLWLPIEVKGEKRSLAMVGHLGMSGQMLLRKPTDPEDKLTRVVIHLKTSRGKQVEFRFI
DQRIFGSLAIDELQPTADGKPGGYSAGLGRGKPWQNLIPIQAAHITRDPLDVDFDEAEVL
AKFKKKNSGIKRVLLDQQTLSGIGNIYADEALWLTRLHYDQPAATISSAKARELLENVRQ
ILAKAVQEGGTSFDEQYKNVNGESGYFAVSLNAYGMTGLPCNRCGREIKRDSWMNRGSHF
CPNCQKLKV
NT seq 930 nt   +upstreamnt  +downstreamnt
atgcctgaacttccagaggtcgagactgttcgagctggactggctccagcgcttaccaat
gcaactgtcattggtgttgatgtcctagattcacgctcgctaaagcgtcaccccggcggg
gttgtagattttcagcaaactatggttggcgccaaagtacttggcgtggttcgccgcgga
aagtttctttggctaccaattgaggtaaagggtgaaaagcgctcgctcgctatggttggt
caccttggcatgagtgggcaaatgctgctgagaaaaccaacagacccagaagacaagcta
actcgggtggtaattcacctcaagacttcgcgcggcaaacaggttgaattccgttttatt
gatcagagaatttttggctcgctggccattgatgaactgcagccaactgccgatggcaag
cccggtggatatagcgccgggcttggcaggggcaagccatggcaaaacttaattccaatt
caggccgcccacatcactcgcgacccgctagatgtggattttgacgaggcggaagtgctt
gccaaattcaaaaagaaaaattccggcattaagcgggtcctgcttgatcagcaaactctg
agtggaattggcaacatttacgctgacgaggcgctctggcttaccaggttgcactatgac
cagccagccgccaccatttcatcggctaaggccagggaattgcttgaaaacgtgcggcag
attttagccaaggccgtgcaagagggcggcactagttttgatgagcagtacaaaaacgta
aatggcgagagcgggtatttcgcggtctcgctcaatgcctacggaatgactggcctgccg
tgtaatcggtgtggacgcgaaataaaacgagattcttggatgaaccgtggcagtcacttt
tgcccaaattgccagaaactcaaggtttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (33)   

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