KEGG   Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_32260
Entry
RLEG3_32260       CDS       T03009                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rlb  Rhizobium leguminosarum bv. trifolii WSM1689
Pathway
rlb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rlb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RLEG3_32260 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rlb03021]
    RLEG3_32260 (rho)
   03019 Messenger RNA biogenesis [BR:rlb03019]
    RLEG3_32260 (rho)
Transcription machinery [BR:rlb03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     RLEG3_32260 (rho)
Messenger RNA biogenesis [BR:rlb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     RLEG3_32260 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 NACHT DUF6360 Spore_III_AA AAA
Other DBs
NCBI-ProteinID: AHF86217
Position
complement(4433824..4435089)
AA seq 421 aa
MAEMKLQELKSKSPTDLLAFAESLEVENASTMRKQELMFAILKMLASQDVEIIGEGVVEV
LQDGFGFLRSPNANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFDDPEQIRHKVHFDNLTPLYPNERFKMELDIPTTKDLSPRVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAVEFLIDKLKQTKNNSDFFESMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagcttcaggaacttaagagtaaatccccgacggatctgctggcattt
gccgaatcgctcgaggtcgagaatgcaagcacgatgcgcaagcaggagctgatgtttgcg
atcctcaagatgcttgccagccaggatgtcgaaatcatcggcgaaggcgtcgtcgaagtg
ctgcaggacggtttcggcttcctgcggtcgcccaatgcgaactacctaccgggcccggat
gatatatatatctccccgtcgcagatccgccgtttctcgctgaaaaccggcgatacggtc
gaaggcccgatccgtggaccgaaggaaggcgagcgctatttcgcgctgctcaaggtcaac
accatcaatttcgacgatccggaacagatccggcacaaagtccatttcgacaatttgacg
ccgctctatccgaacgagcgcttcaagatggaactcgatattcccaccaccaaggatctg
tcgccacgtgtgatcgacctggtggcgccgctcggcaagggccagcgtggattgatcgtc
gcgccgccgcgtaccggtaaaaccgtgttgttgcagaacatcgcgcattcgatcaccgcc
aaccatccggagtgctatctgatcgtcctgctgatcgatgaacgccccgaagaagtgacc
gacatgcagcgctcggttcgcggcgaggttatctcctcgactttcgacgaaccagccgtc
cgtcacgtgcaggtggccgagatggtcatcgagaaagccaagcgccttgtcgaacacgga
cgcgacgttgtcatcctgctcgattcgatcacgcgcttgggccgtgcctataacacggtc
gttccctcgtcaggcaaggtcctgaccggcggtgtggacgccaacgctctgcagcggccg
aagcgcttcttcggcgcggcgcgtaacatcgaggaaggcggctctttgacgatcatcgcg
acggcgctgatcgatactggcagccgcatggacgaagtgatcttcgaagaatttaagggt
accggcaactcggaaatcgtcctcgatcgcaaggtcgctgataagcgcatcttcccggca
atggacatcctgaagtccgggacgcgcaaggaggaccttctggttccgcgccaggatctg
cagaagatcttcgtgctccgccgcatcctggctccgatgggcacgaccgatgcggtcgaa
ttcctgatcgacaagctcaagcagacgaagaacaattccgacttcttcgaatcgatgaac
acctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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