KEGG   Rhizobium leguminosarum bv. trifolii CB782: RLEG12_17735
Entry
RLEG12_17735      CDS       T03015                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
rlu  Rhizobium leguminosarum bv. trifolii CB782
Pathway
rlu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rlu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    RLEG12_17735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rlu03021]
    RLEG12_17735
   03400 DNA repair and recombination proteins [BR:rlu03400]
    RLEG12_17735
Enzymes [BR:rlu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     RLEG12_17735
Transcription machinery [BR:rlu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     RLEG12_17735
DNA repair and recombination proteins [BR:rlu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      RLEG12_17735
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Biotin_lipoyl_2 Peptidase_M23 RPOC_hybrid Apocytochr_F_C RnfC_N
Other DBs
NCBI-ProteinID: AHG44964
Position
1284715..1288923
AA seq 1402 aa
MNQEVMNLFNPQVPAQNFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRISTLLDMTLKDVERVLYFENYIVTEPGLTALKEHQLLSEEEYMLAVDEYGEDQFTA
MIGAEAIYEMLASMNLEKIAGDLRAELADTTSDLKQKKLMKRLKIVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEKPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSILNQNEPGEGMAFSDLGELHHALE
SKVVTLHTKIRGRFKSVDEDGKPYSKIYETTPGRLLIGELLPKNGKVPFDICNQEMTKKN
ISKMIDTVYRHCGQKDTVIFCDRIMQLGFSHACRAGISFGKDDMVIPDAKAKIVADTESL
VKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEEMMARIKAVEFDDKTGRQKPMNSIY
MMSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVTHVDCGTETGLTMTAIVDAGQVVASLGARILGRT
ALDDIDHPVTGERIVDAGKMILEPDVIEIEKAGIQSIRIRSALTCEIQTGVCSVCYGRDL
ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASYEGTVQIKNRN
ILRNSDGNLVAMGRNMTVQILDERGVERSSQRVAYGSKLHVDEGDKVKRGQRLAEWDPYT
RPMMTEVAGTVQFEDLVDGLSVLEATDESTGITKRQVIDWRSTPRGSDLKPAIVIKDASG
NVAKLSRGGDARFLLSVDAILSVEPGTKVSQGDVLARSPLESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTIRLGRDYKNKRRVIIEPAEDGVEPVEYLIPKGKPFHLQEGDYIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKVE
ITDAGDSTYIVGDNVDRIELEDVNDHLIEQGKKPAYGDPVLLGITKASLQTPSFISAASF
QETTKVLTEAAIAGKTDGLQGLKENVIVGRLIPAGTGGTMTQIRRIATSRDELILEERRK
GSGAAVATPMLQDMAEKAPAAE
NT seq 4209 nt   +upstreamnt  +downstreamnt
atgaaccaagaggtcatgaatcttttcaatccgcaggtgcctgcacagaatttcgattcc
attcggatttcgatcgcgtcgccggagaagatcctctcctggtcctacggtgagatcaag
aagccggaaaccatcaactaccgcacgttcaagccggaacgcgacggtctgttctgcgcg
cgcatcttcgggcccatcaaggactacgaatgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgaaaagtgcggcgtcgaagtcacgctgtcgcgcgttcgccgt
gagcgcatgggccatatcgagctcgccgctcccgttgcccacatctggttcctgaagtcg
ctgccgtcgcgcatctcgacgctgctcgacatgacgctgaaggatgtcgaacgcgtcctc
tatttcgaaaactacatcgtcaccgagccgggcctgactgccctcaaggagcaccagctc
ctctcggaagaagagtatatgctcgccgttgacgaatacggcgaagaccagttcaccgcg
atgatcggcgctgaggcgatctacgagatgctggcctcgatgaacctcgaaaagatcgct
ggcgacctgcgcgccgagcttgccgacaccacgtcggatctcaagcagaaaaagctgatg
aagcgcctgaagatcgtcgagaacttcatggagtcgggcaaccgtccggaatggatgatc
atgaaggtcgttccggtcatcccgccggacctgcgtccgctggttccgctcgacggcggc
cgtttcgcgacctcggacctgaacgatctctaccgccgcgtcatcaaccgtaacaaccgt
ctgaagcgcctgatcgagcttcgtgcgcctggcatcatcatccgcaacgaaaagcgcatg
ctgcaggaatcggttgacgcgctgttcgacaacggccgtcgcggccgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgctctccgacatgctgaagggcaagcagggacgcttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgttcggttatcgtcaccggc
ccggaactgaagctgcaccagtgcggtctgccgaagaagatggcgctcgagctcttcaag
ccgttcatctatgcccgcctcgacgccaagggttattcctcgaccgtcaagcaggccaag
aagctggtcgaaaaggaaaagcccgaagtctgggatatcctcgatgaggttatccgcgag
catccggttctcctgaaccgcgcaccgacgctgcaccgcctgggcatccaggccttcgaa
cccaccctggtcgaaggcaaggcgatccagctgcatccgctcgtctgcacggccttcaac
gccgacttcgacggtgaccagatggccgttcacgtgccgctgtcgctcgaagcccagctc
gaagctcgcgtgctgatgatgtccaccaacaacatcctgcatccggccaacggcgcgccg
atcatcgttccctcgcaggacatggttctcggcctctattacctgtcgatcctgaaccag
aacgagccgggcgaaggcatggccttctccgatctcggcgagctgcatcacgccctcgaa
agcaaggtcgtgacactgcacaccaagatccgcggccgtttcaagtcggtcgacgaggat
ggcaagccctactcgaagatctatgagacgacgcctggccgtctgctcatcggcgaactg
ctgccgaagaacggcaaggttcccttcgacatctgcaaccaggaaatgaccaagaagaac
atctccaagatgatcgacacggtctaccgtcactgcggccagaaggacacggtcatcttc
tgcgaccgcatcatgcagctcggcttctcccatgcctgccgcgccggcatttcgttcggc
aaggacgacatggtcattccggatgccaaggccaagatcgttgccgacaccgaaagcctg
gtgaaggaatacgagcagcagtataatgacggcctgatcacccagggcgaaaagtacaac
aaggttgtcgacgcctggggcaaagccaccgaaaaggtcgccgaagagatgatggcccgc
attaaggcggtcgaattcgacgacaagaccggtcgtcagaagccgatgaactcgatctac
atgatgagccattccggcgcccgcggttctccgaaccagatgcgtcagctgggcggcatg
cgcggcctcatggccaagccgtcgggtgaaatcatcgagaccccgatcatctcgaacttc
aaggaaggcctgaccgtcaacgagtacttcaactcgacgcacggcgcccgcaaggggctg
gcagacaccgccttgaagaccgccaactccggctacctgacccgccgtcttgtcgacgtc
gcgcaggattgcatcgtcacgcacgtcgattgcggcactgaaaccggcctcaccatgacc
gccatcgtcgatgccggtcaggtggttgcctcgctcggcgcccgcatcctcggccgcacg
gcgctcgatgacatcgatcatccggtcacgggtgagcgcatcgtcgatgccggcaagatg
atcctcgagcccgatgtcatcgagatcgagaaggccggtatccagtcgatccgcatccgg
tcggcgctgacctgcgaaatccagacgggcgtctgctcggtctgctacggccgcgacctg
gcccgtggtacgcctgtcaatatgggcgaagccgtcggcgtcatcgcggctcagtcgatc
ggcgagccgggcacccagctcaccatgcgaaccttccaccttggcggtacggccaccgtg
gtcgaccagtcgttcctggaagcctcgtacgaaggtacggtgcagatcaagaaccgcaac
atcctgcgcaactccgatggcaacctcgttgccatgggccgcaacatgaccgtccagatc
ctggacgagcgtggcgtggaacggtcttcgcagcgtgtggcctacggttcgaagctgcat
gtcgacgaaggcgacaaggtcaagcgcggccagcgtctggcggagtgggatccttacacc
cgtccgatgatgaccgaagtggctggtaccgttcagttcgaagacctggtcgacggtctc
tccgttctggaagcaaccgacgaatccaccggcatcaccaagcgtcaggtcatcgactgg
cgttcgaccccgcgcggttcggacctcaagccggcgatcgtcatcaaggatgccagcggc
aatgtcgccaagctttcgcgtggtggtgacgcccgcttcctgctctcggtcgatgcgatc
ctgtcggtcgagccaggcaccaaggtctcccagggtgacgtgcttgcgcgttcgccgctg
gaaagcgccaagaccaaggacatcaccggtggtctgccgcgtgttgccgagctcttcgaa
gcccgccgtccgaaggaccacgccatcatcgcagagatcgatggtacgatccgcctcggc
cgcgactacaagaacaagcgccgcgtcatcatcgagccggcggaagacggtgtcgagcct
gtcgaatacctgatcccgaagggcaagcctttccaccttcaggaaggtgactatatcgaa
aagggtgactacatcctcgacggtaacccggctccgcacgacatcctggcgatcaagggc
gtcgaggctctggcctcctacctcgtcaacgagatccaggaagtctaccgcctgcagggc
gttgtcatcaacgacaagcacatcgaggtgattgtccgtcagatgctgcagaaggtggag
atcaccgatgcaggcgactcgacctatatcgtcggcgacaatgtcgaccggatcgagctc
gaagacgtcaacgatcacctgatcgaacagggcaagaagcccgcctatggcgatccggtt
cttctcggcatcaccaaggcgtcgctgcagaccccgtccttcatctcggccgcatccttc
caggaaacgaccaaggtgctgacggaagctgcgatcgccggcaagaccgacggtctgcag
ggtctgaaggaaaacgtcatcgtcggccgcctcatcccggccggcactggcggcaccatg
acccagatccgccgtatcgctacgtcgcgcgacgagctgatcctcgaagagcgccgtaag
ggctccggtgctgccgttgccacgccgatgctgcaggacatggccgaaaaggctccggct
gcggaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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