KEGG   Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0928
Entry
Rmag_0928         CDS       T00438                                 
Name
(GenBank) ATP-dependent DNA helicase RecG
  KO
K03655  ATP-dependent DNA helicase RecG [EC:5.6.2.4]
Organism
rma  Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Rmag_0928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rma03400]
    Rmag_0928
Enzymes [BR:rma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Rmag_0928
DNA repair and recombination proteins [BR:rma03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Rmag_0928
SSDB
Motif
Pfam: DEAD Helicase_C RecG_dom3_C RecG_wedge ResIII AAA_30 tRNA_anti-codon nSTAND3 SecA_DEAD IstB_IS21 Helicase_RecD SLFN-g3_helicase
Other DBs
NCBI-ProteinID: ABL02641
UniProt: A1AXI4
Position
990509..992569
AA seq 686 aa
MHQLFSPIIVLNGLGPKIQQKLNAIGIFNLEHLLFHLPTRYQDKTKLTKLNQAQVGDEVL
IQLTIEHIEQVSTHQRQLLCYLSDSGHQDLLLRFFHFNQKQNFIRGDIIQCFGEIKIGKN
SLEMHHPEYRLISKGQAHLLEKTLSPIYALTANIHQAQMKKWIDIALETLQQSNLYDNFK
NLANNSMPTLKQALKTLHHPKVNDNIEQITNFNHPSQQRLIIEELCAQRLNLLQLKDKRK
SKKSNIFKIKDVLTKKVLNVLGFQLTKAQQRSIDEINSDLASNFPMLRLLQGDVGSGKTI
VAVFACLQAIENGFQVTIMAPNEALASQHLQEFSNYLDPLGIDIAFLTGSQSATQRVERL
KKIIIDEVKIIIGTHVFLQTQVVFNKLGLVIIDEQHKFGVHQRLSLVQKAHNTPHQLVMT
ATPIPTSLIMSAYADLDCSVIDELPPGRKPTKTIALSNDKKDKVIEKIKQVCTTGNQVYW
VCTLIEESETLRAKSATSTHHYLQENLKELTVVLIHGKMHKDEKSTIMDQFLKNKIDVLV
ATTVIEIGVNVTNSPLIVIENSERLGLSQLHQLRSRAGRDTNTSVCILMYQAPLSHSSFV
RLDTLRQTNDGFKIAQKDLELRGPGEILGTQQAGIANMKIANIVRDRYLLKQVYFYSEKF
LKLRKDKQQALITRWITDDKSQYGNT
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgcatcagttatttagtccaatcattgtattaaatggattaggcccaaaaatacagcaa
aaactaaacgctattggtatttttaatttggaacatttattgtttcatctaccaacacgt
tatcaagacaaaaccaagctaactaagctaaatcaagctcaagtaggtgatgaggtgtta
attcagctaaccatagaacatatcgaacaagtatcaactcatcagcgacaactgttatgc
tacttatctgattctggtcatcaagacttattacttcgattttttcattttaatcaaaaa
caaaacttcattcgtggtgatatcatccaatgctttggtgaaataaaaattggcaaaaat
agcttagaaatgcaccaccctgaatatcgattaatctctaaagggcaggctcacttacta
gaaaaaacactcagtcccatatatgcattaactgccaatattcaccaagcacaaatgaaa
aaatggattgatattgcattagagactttacaacaatcaaacttatatgacaattttaaa
aatctagcaaataattctatgcctactcttaaacaggctttgaagacactacaccatcct
aaagttaatgataatatcgaacaaattactaattttaaccacccttcacaacaacgcctg
attattgaagagttatgtgcacaacgacttaacttactccaactcaaagataaacgtaaa
tccaaaaagtctaatatctttaagattaaagacgttttaaccaaaaaagtactaaacgtc
ttagggtttcaactaacgaaagcacaacagcgtagcattgatgaaattaattcagacctt
gcatcgaactttccaatgcttagattattacaaggtgacgtaggatcaggaaagactatt
gtagccgtatttgcttgcttacaagcaatcgaaaatggatttcaagttaccattatggca
cccaatgaggcacttgcttcacaacatttacaagaattttcaaattatctagaccctttg
ggtattgatattgcatttttaactggttcacaaagtgcaacacaaagagtagaacgactt
aaaaaaattatcattgatgaagtaaaaattatcattggcacccacgtattccttcaaact
caagttgtttttaataaattaggtttagtgattattgacgaacagcataaattcggtgta
catcaacgcttatcacttgtacaaaaagcacacaatacaccccatcaactggtcatgact
gccacccctattccaacctcattaatcatgagtgcctatgcagatttagattgttcagtg
attgatgaattacctcctggcagaaaacccactaaaaccattgcacttagcaatgataaa
aaagacaaagtgattgaaaaaatcaaacaagtttgtactactggtaatcaagtatattgg
gtatgcacactaattgaagaatcagaaacgcttcgtgctaaatctgccaccagtactcat
cattatctacaggaaaatttaaaagaattaaccgtagtgctgattcatggaaagatgcac
aaggatgaaaaatccactattatggatcaatttctaaaaaacaagattgatgttttagtc
gccaccacagtcattgaaattggggttaatgtcaccaactcaccactcatagtgattgaa
aactctgaaagattgggactttcacaattacaccaattacgtagccgtgcagggcgagac
actaatactagcgtttgtattttaatgtatcaggcgccactcagtcacagttcttttgta
cgacttgacaccttaagacaaacaaatgatggctttaaaattgcacaaaaagacttagag
cttcgtggccctggtgagattttaggcacacagcaagcaggtatcgctaatatgaaaatt
gccaatattgtgcgtgatagatatctactcaaacaagtatatttttactcagaaaaattc
ttaaaattaagaaaagacaagcagcaagcacttattactcgttggattactgatgataaa
agccaatatggtaatacttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (30)   

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