KEGG   Cupriavidus metallidurans: Rmet_0257
Entry
Rmet_0257         CDS       T00351                                 
Symbol
yibK
Name
(GenBank) putative rRNA methylase
  KO
K03216  tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
Organism
rme  Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:rme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rme03016]
    Rmet_0257 (yibK)
Enzymes [BR:rme01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.207  tRNA (cytidine34-2'-O)-methyltransferase
     Rmet_0257 (yibK)
Transfer RNA biogenesis [BR:rme03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    Rmet_0257 (yibK)
SSDB
Motif
Pfam: SpoU_methylase Malate_DH
Other DBs
NCBI-ProteinID: ABF07143
UniProt: Q1LRT3
Position
complement(275265..275735)
AA seq 156 aa
MFNVVLVEPEIPPNTGNVIRLCANTGAQLHLVKPLGFPLEDARMRRAGLDYHEYATMRVH
ESWDALMAAEQPDPTRMFALTTHGSTPFGQVSFAPGDWFVFGSETRGLAPERREWFPSAQ
RIRLPMRPNNRSLNLSNTVAVVVFEAWRQNGFAGGS
NT seq 471 nt   +upstreamnt  +downstreamnt
atgttcaacgtcgttcttgtcgaacccgaaatcccgccgaacaccggcaatgtgatccgc
ctgtgcgccaacaccggcgcgcagctccatttggtcaagccgttgggatttccactcgaa
gacgcccggatgcgccgcgcggggctcgactatcacgagtacgcgacgatgcgcgtgcat
gaaagctgggatgcgttgatggctgccgagcagccggaccccacgcgcatgttcgcgctg
accacgcacggctccacgccgttcggccaggtcagcttcgcgccgggcgactggttcgta
ttcggttcggagacccgcgggctcgcaccggagcgccgcgagtggttcccgtccgcgcag
cgcatccgcctgccgatgcgccccaacaaccgcagcctcaatctgtcgaacacggtggcc
gtggtcgtcttcgaggcatggcgtcagaacggcttcgcgggcggaagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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