KEGG   Rhodothermus marinus SG0.5JP17-172: Rhom172_1316
Entry
Rhom172_1316      CDS       T01606                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
rmg  Rhodothermus marinus SG0.5JP17-172
Brite
KEGG Orthology (KO) [BR:rmg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rmg03032]
    Rhom172_1316
   03400 DNA repair and recombination proteins [BR:rmg03400]
    Rhom172_1316
Enzymes [BR:rmg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Rhom172_1316
DNA replication proteins [BR:rmg03032]
 Prokaryotic type
  DNA Topoisomerases
   Rhom172_1316
DNA repair and recombination proteins [BR:rmg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Rhom172_1316
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C DUF3782
Other DBs
NCBI-ProteinID: AEN73243
Position
1513223..1515550
AA seq 775 aa
MPVVEVIPLHETTRERYLNFALSVITSRALPDIRDGLKPVQRRILYAMFQHLRLYPDARY
RKSATIVGEVMGKYHPHGDAAIYDAMVRMAQDFSLRYPLVDGHGNFGSIDGDAAAAMRYT
EARLRPLAMQLLEELRRQTVPMRPNFDGTLFEPVVLPARFPNLLVNGASGIAVGMATNIP
PHNLGEVIDALIYLIDVPNAPLETILERFIQGPDFPTGGRVLNTREELLEIYRTGEGPIE
LRGEYKLEGKTRIVITSIPYGIAKADLVEKIAEHIAAGKVPQLSDVRDESTDEVRIVLEL
RRGADPEAAMAYLFRHTPLQTRFHVNLTCLVPTANPEVAAPRKVDLMTMLRAFLEFRMEV
VVRRLRYDLEQLERRIHILRGFEKIFGALDEAIRIIRAARDKADAAQRLMHRFSIDDEQA
DAILETKLYKLSRLEIEAIRQELEEKERQAAELRALLADEAARWGLIREELKAIKKQFAD
ARRTVIAGPDEGFEYNQEAYIVDEDVYVIVTRDGWVKRQRSYTDVQSIRVREGDTVGWVL
PGSTRATVGFFTNYGRCYTTRIDSLPSTTGYGDPVQKLFDFSDRERVVGVVVFDERALPR
PVPEPEIEPALFENGEQEAPRVHVVAVTRKGQTLRIPIDGFREPSTKNGRLFMRLEKGDE
VLGVEVSAGDENVCLASREGYVLIFPVHQIPPVKSAAKGVIAMRLGRGDEVLGFTLASAA
REGLEVETSRGRREIVRTTKFEVSRRGNRGRQIIRRGQLVRVIPAPVEIRLNGQG
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgccggttgtagaagtcattcccctgcacgagacgacgcgggagcgttatctgaacttc
gcgttgtccgttattacaagccgcgcgttgcccgacatccgggacggcctcaagcccgtc
cagcggcgcattctgtatgcgatgtttcagcacctgcgtctctacccggacgcccgctat
cgcaaaagcgccacgatcgtcggcgaggtgatgggtaagtatcacccgcacggcgacgcg
gccatctacgacgccatggtacgcatggcgcaggacttctcgctgcgctatccgctggtg
gacgggcacggcaacttcggctcgatcgacggcgatgcggcggccgctatgcgctacacg
gaggcgcggctgcgtccgctggccatgcagctgctggaggagctgcgacgccagaccgtc
cccatgcggcccaacttcgacggcacgcttttcgaaccggtggtcctgccggcccgcttt
ccgaacctgctcgtcaacggcgccagcggtatcgcggtaggcatggcgaccaacatcccc
ccgcacaacctgggggaggtgatcgacgcgctcatctatctgatcgacgtgcccaacgcg
ccgctggaaaccatcctggagcggttcattcaggggccggactttccgaccggcggccgg
gtgctcaacacgcgcgaagagctgctggaaatctaccgcacgggcgaggggcccatcgaa
ctccgcggcgaatacaagctggagggcaagacgcgcatcgtcattacgtcgatcccctac
ggcatcgccaaggccgatctggtggaaaagatcgccgagcacatcgcggccggcaaggtg
ccccagctttcggacgtgcgggacgagtcgaccgacgaggtgcgcatcgtgctcgagctg
cgccggggcgccgacccggaggcggccatggcctacctgtttcgccacacgccgctccag
acgcgcttccacgtgaacctgacgtgcctggtaccgacggccaacccggaggtggccgcg
ccccgcaaggtcgatctgatgaccatgctccgggcttttctcgaattccgcatggaagtg
gtggtgcggcggctgcgctacgatctggagcaactcgagcgtcgcattcacatcctgcgc
ggattcgagaagatcttcggggcgctggacgaagccatccggatcatccgcgccgcacgc
gacaaggccgacgccgcccagcgcctgatgcatcgcttcagcattgatgacgagcaggcc
gacgccatcctggagacgaagctctacaagctctcgcggctggaaatcgaagcgattcgt
caggaactggaagaaaaagaacgtcaggcggccgagctgcgagccctgctggccgacgaa
gccgcccgctggggcctcattcgcgaggaattgaaagccatcaaaaaacagttcgccgac
gcgcggcgcaccgtcatcgccggacccgacgagggcttcgagtacaaccaggaagcctac
attgtggacgaggacgtgtacgtcatcgtcacgcgggacggctgggtcaagcgccagcgc
tcttacacggacgtgcagagcattcgcgtccgcgagggcgatacggtgggctgggtgctt
ccgggttcgacccgcgccaccgtcggctttttcacgaactacggccgttgctacaccacg
cgcatcgactcgctccccagcacgacggggtacggcgatccggtgcagaagctgttcgac
ttttcggaccgggagcgcgtcgtcggggtggtggtcttcgacgagcgggcgcttccccgg
ccggttccggagcccgaaatcgaaccggcgctgttcgaaaacggggagcaggaagcgccc
cgcgtgcatgtggtggccgtcacgcgcaaaggccagacgctccggattcccatcgacggc
ttccgggagccgtccacgaagaacggccgacttttcatgcgcctggaaaagggcgacgaa
gtgctgggcgtcgaggtgtcggccggcgacgagaacgtctgtctggcttcacgtgagggc
tacgtgctcatcttccccgtgcaccagatcccgccggtcaagtcggcggccaaaggcgtg
atcgccatgcggctgggcaggggcgacgaggtgctgggctttacgctggcttcggccgcc
cgggaagggctggaggtggaaaccagccggggccgacgcgagatcgtgcgcaccacgaag
ttcgaggtgtcgcgccggggcaaccggggccgacagatcatccggcgcggccagctcgtc
cgggtcatcccggcgccggtggaaattcgactgaacggacagggataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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