KEGG   Rickettsia montanensis: MCI_00650
Entry
MCI_00650         CDS       T01784                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rmo  Rickettsia montanensis
Pathway
rmo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rmo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MCI_00650 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rmo03021]
    MCI_00650 (rho)
   03019 Messenger RNA biogenesis [BR:rmo03019]
    MCI_00650 (rho)
Transcription machinery [BR:rmo03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     MCI_00650 (rho)
Messenger RNA biogenesis [BR:rmo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     MCI_00650 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 AAA_22 OB_RNB ATPase_2 Spore_III_AA NACHT AAA
Other DBs
NCBI-ProteinID: AFC73098
UniProt: H8KAN1
Position
116041..117417
AA seq 458 aa
MNTTNKESTAELNNTESNNNHNNFAENGNIINLKQLKRKLPEELQAQAEELKIENINSLL
KQELVFAILKKSVEQGGLIVGEGVLEVLPDGFGFLRSPEVNYLAGPDDIYISPSQIRRFG
LRTGDTVEGQIRAPKAGERYFALLKVNRVNFEDPSKAYHRVHFDNLTPLYPDEKLGLELE
NNSKDSKDFSTRVIELVAPMGKGQRALIVAPPRTGKTVLLQNIAHAITTNNPEVFLIVLL
IDERPEEVTDMQRSVRGEVVSSTFDEPASRHVQLAEMVIKKAKRLVEHKKDVVILVDAIT
RLARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIENGGSLTIIGTALIETGSRMD
EVIFEEFKGTGNSEIILDRKIADKRIYPAIDITRSGTRKEDLLVDKIILNKMWVLRRIID
PMGSSEAMEFLLKKLENTKTNGEFFEMMKSPERPKNGL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaacacaactaataaagaatccacagcagaacttaacaataccgaatccaataacaat
cataataattttgcagagaacggtaatattattaatttaaaacaattaaaacgtaaatta
ccggaggaactacaagctcaagcagaagaattaaaaattgaaaatattaattcattactt
aaacaagaattagtttttgcaattttgaaaaaatccgtagagcagggaggtttaatagtg
ggagagggggtacttgaagtactacctgacggatttggttttttacgttcgccggaagta
aactacttagcaggccctgatgatatttatatttctcctagtcagattcgtcgctttggt
ctgcgtaccggtgatactgtagaaggtcagatcagagctccaaaagccggagaacgttat
tttgctttactgaaagtcaatagagtaaattttgaagacccttctaaagcttatcatcgt
gttcattttgataatttaacccccttatatcctgatgaaaaattaggattagaacttgaa
aataatagtaaagatagtaaggattttagtacacgggttattgaacttgttgcccctatg
ggtaaaggacaacgtgcattaatagtagcaccgcctcgtacaggtaaaaccgtattatta
caaaatatagcacatgcaattacaaccaataatccggaagtatttttaatagtactgtta
atagatgaaagacctgaagaagtaaccgatatgcaacgttccgtgcgtggggaggttgtt
agctctactttcgatgaaccggcaagtaggcacgtgcagcttgcagaaatggttatcaaa
aaagcaaagcgtttagtagaacataaaaaagatgtggtaattttagtagatgcgataaca
cgtttagctcgtgcttataataccgtagtgccgtcatcaggtaaagtattaacgggcggt
gttgatgctaatgctcttcagagacctaaaagatttttcggagcagcaagaaatattgaa
aacggcggttcacttactataatcggtacggctttaattgaaaccggttctcgtatggat
gaggtaatttttgaggagtttaaaggtacaggtaattccgagataattctagatcgtaag
attgccgataagcgtatttatccggctattgatataactagatcaggaactagaaaagaa
gatttattagtagataaaataatattaaataaaatgtgggttcttcgtcgtattatcgat
ccgatgggtagcagtgaagcaatggaatttttactcaaaaaacttgaaaatactaaaact
aacggtgagttttttgagatgatgaagagtcctgaacgtcctaagaacggtctatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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