KEGG   Rattus norvegicus (rat): 100362431
Entry
100362431         CDS       T01003                                 
Symbol
Ift70a1
Name
(RefSeq) tetratricopeptide repeat domain 30B
  KO
K19683  tetratricopeptide repeat protein 30
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    100362431 (Ift70a1)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   100362431 (Ift70a1)
SSDB
Motif
Pfam: TPR_2 TPR_19 TPR_1 TPR_16 TPR_7 TPR_12 ANAPC3 TPR_14 SRP_TPR_like TPR_8 TPR_6
Other DBs
NCBI-GeneID: 100362431
NCBI-ProteinID: NP_001258423
RGD: 2318157
Ensembl: ENSRNOG00000069321
UniProt: A6HMG6 A0A8I5ZT76
Position
3:complement(81309158..81312612)
AA seq 664 aa
MAWQSSSKVPDGEFTAVVYRLIRDSRYSEAVQLLSAELQGSPRSRAGLSLLAYCYYRLQE
FELAAECYEQLSQMHPELEQYRLYQAQALYKACLYPEATRVAFLLDNPTYQTRVLRLQAA
IKYSEGDLPGARSLVEQLLSGEAGEDSGGENDPDGLVNMGCLLYKEGHYEAACSKFLAAL
QASGYQPDLSYNLALAYYSSRQYAPALKHIADIIERGIRQHPELGVGMTIEGIDIRSVGN
TAVLHQTALIEAFNLKAAIEYQLRNFEVAQETLTDMPPRAEEELDPVTLHNQALMNMDAK
PTEGFEKLQFLLQQNPFPPETFGNLLLLYCKYEYFDLAADVLAENAHLTYKFLTPYLYDF
LDAMITCQTAPEEAFIKLDGLAGMLTDQLRRLTKQVQEARHNRDDEIIKKAVNEYDETLE
KYIPVLMAQAKIYWNLENYQMVEKIFRKSVEFCNDHDVWKLNVAHVLFMQENKYKEAIGF
YEPIVKKNYDNILGVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLSYEDPDKKIY
HLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYHKKLGTDTWYYAKRCFLSLLENMSKHM
IVLCDGVVQECVQFLEHCEIFGRNIPAVLEQPLEEERIHTGKNTVTYESRLLKALIYEII
GWNM
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggcgtggcaaagcagctcgaaagttcccgacggtgagttcacagcggtggtgtacagg
ctcatccgcgactcccgctactcagaggcggtgcagctactgagcgcagagctgcagggg
agtccccgcagccgcgcagggctgtcgctgctggcctactgctactaccgcctgcaggag
ttcgagctcgctgcggagtgctatgagcaactgagccagatgcatccggaactcgagcag
taccgcctgtatcaggcccaggcgctctacaaggcctgcctgtatccagaggccacccgg
gtcgccttcctcctggacaaccccacctatcagactcgagtccttcgtctgcaggctgct
atcaagtacagtgaaggggatctcccaggagccaggagcttggtggagcagctgctgagt
ggggaagctggagaagacagtggaggggagaatgacccagatggcttggtcaacatgggt
tgtctgctctacaaggagggacactacgaagctgcctgttccaagttcttagcggccctg
caggcttctggttaccaacctgacctttcctacaacttggctttagcctattacagcagt
cggcagtatgcgcctgctctgaagcatatcgctgacatcattgagcgtggcatccgtcaa
cacccagaactaggtgtgggcatgaccattgaaggcattgatattcgtagtgtcggcaac
actgcagtccttcatcagactgctctgatcgaagccttcaacctcaaggcagccatagag
taccagctgagaaactttgaggtagcccaagaaaccctcactgacatgccacccagagca
gaggaagagttggaccccgtgaccctgcacaaccaggctctgatgaacatggatgccaag
cccacagagggctttgaaaagctccagtttctgctccagcaaaaccccttccccccagag
acctttggcaacctgctgctgctttactgtaaatatgagtatttcgacctggcagctgat
gttctagcagaaaacgcccacttgacttacaagttcctcacaccctatctctatgacttc
ttggatgccatgatcacttgccagacagctcctgaagaggctttcattaaacttgatggg
ctagcaggtatgctgactgaccagctcaggagactcactaaacaagttcaagaagcaagg
cataacagagacgatgaaattattaaaaaagctgtgaatgaatatgacgaaacccttgag
aagtatatccctgtactgatggcccaggcaaaaatctactggaatcttgagaattatcaa
atggtggagaagatcttccgcaaatctgtggaattctgtaatgaccatgatgtgtggaag
ctgaatgtggcccatgtcctcttcatgcaggaaaacaagtacaaggaggccattggtttc
tatgagcccattgtcaagaagaattatgataacatcctgggtgtcagtgctatcgtgtta
gctaacctctgtgtttcctacattatgacaagtcaaaatgaggaagctgaggagctgatg
aggaagattgagaaagaggaggaacaactctcctatgaagacccggacaagaaaatctac
cacctttgcattgtgaatttggtgataggaaccctttattgtgccaaaggaaactatgac
tttggcatctctcgggttatcaagagcctggagccttaccataagaagctgggaactgat
acgtggtattatgccaaaagatgcttcctgtccttactggagaacatgtcaaagcacatg
atagttctttgtgatggtgttgttcaagaatgtgtccagtttctagagcactgcgagatt
tttggtagaaacatccctgctgttctcgaacaacccttggaggaagaaagaattcacact
ggaaagaatacagtcacttatgagtccagactgttgaaagctttgatttatgagatcata
gggtggaatatgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (24)   

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