KEGG   Rattus norvegicus (rat): 114523
Entry
114523            CDS       T01003                                 
Symbol
Ntn1
Name
(RefSeq) netrin-1 precursor
  KO
K06843  netrin 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    114523 (Ntn1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:rno00536]
    114523 (Ntn1)
Glycosaminoglycan binding proteins [BR:rno00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   114523 (Ntn1)
SSDB
Motif
Pfam: Laminin_N NTR Laminin_EGF
Other DBs
NCBI-GeneID: 114523
NCBI-ProteinID: NP_446183
RGD: 619809
Ensembl: ENSRNOG00000003947
UniProt: F1LPC8
Position
10:complement(53398852..53597595)
AA seq 604 aa
MMRAVWEALAALAAVACLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAF
GKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCW
QSENYLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQ
CRKMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQD
WVTATDIRVAFSRLHTFGDENEDDSELARDSYYYAVSDLQVGGRCKCNGHAARCVRDRDD
SLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLS
GRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTT
GQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSMEEPEDCDSYCKASK
GKLKMNMKKYCRKDYAVQIHILKADKAGDWWKFTVNIISVYKQGTSRIRRGDQSLWIRSR
DIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGK
CKKA
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgatgcgcgctgtgtgggaggcgctggcggcgctggcggcggtggcgtgcctggtgggc
gcggtgcgcggcgggcccgggcttagcatgttcgccggccaggcggcgcagcctgatcct
tgctcggatgagaacgggcacccacgccgctgcatcccggactttgtcaacgcggctttc
ggcaaggacgtgcgcgtgtccagcacctgcggccggcccccggcgcgctactgcgtggtg
agcgagcgtggcgaggagcggctgcgctcctgtcacctctgcaactcttccgatcccaag
aaagcgcatccgcccgccttcctcaccgacctcaacaatccgcacaacctgacgtgctgg
cagtctgagaactacctgcagttcccgcacaacgttacgctcactctgtcgctcggcaag
aagtttgaggtgacctatgtgagcctgcaattctgctcgccccggccagagtccatggcc
atctacaagtccatggactacgggcgcacgtgggtgcccttccaattctattccactcag
tgccgcaaaatgtacaaccggccgcaccgcgcgcccatcactaagcagaacgagcaggag
gcggtgtgcaccgactcgcacaccgacatgcgcccgctctccggcgggctgatcgctttc
agcacgctggacgggcggccctcggcgcacgacttcgacaactcgccggtgctgcaggac
tgggtcaccgccacagacatccgcgtggctttcagccgcctgcacacgtttggcgacgag
aacgaagatgactcggagctggctcgcgactcctattactatgcagtatctgacctgcag
gttggcggccgctgcaagtgcaatggccacgcggcgcgttgcgtgcgcgaccgagacgac
agtctggtgtgtgactgtaggcacaacacggccggccctgaatgcgaccgttgcaagccc
ttccactacgatcggccctggcagcgcgccacggctcgcgaggccaacgagtgcgtggcc
tgcaactgcaaccttcatgctcggcgctgcagattcaacatggagctttacaagctatca
gggcgcaagagcgggggtgtctgtctcaactgccgccacaacactgccggccgccactgc
cactactgcaaggagggcttctaccgagacatgggcaagcctatcacccaccggaaggct
tgcaaagcctgtgattgccaccctgtgggtgctgctggtaagacctgcaatcaaaccacc
ggccagtgtccctgcaaggacggcgtgacaggcatcacctgcaaccgctgtgccaaaggc
taccagcagagccgctcccccatcgccccttgcattaagattcctgtagcgccacccacc
actgcagccagcagcatggaagaacctgaagactgtgactcctactgcaaggcttccaaa
ggaaaactgaagatgaacatgaagaaatactgcaggaaggactatgctgtccagatccac
attctgaaggcggacaaagcaggggactggtggaagttcacagtgaacatcatctccgtg
tacaagcagggcacaagtcgtatacgccgtggtgaccagagtttgtggatccgttcgcga
gacatcgcttgcaagtgtcccaaaatcaagcccctcaagaagtacctgctgctgggcaat
gctgaggactcgcctgaccagagtggcatcgtggcagacaagagcagcctggtgatccag
tggcgggacacatgggcacgacggctgcgcaagttccagcagcgggagaagaagggcaag
tgcaagaaggcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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