KEGG   Rattus norvegicus (rat): 117029
Entry
117029            CDS       T01003                                 
Symbol
Ccr5
Name
(RefSeq) C-C chemokine receptor type 5
  KO
K04180  C-C chemokine receptor type 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03250  Viral life cycle - HIV-1
rno03260  Virion - Human immunodeficiency virus
rno04060  Cytokine-cytokine receptor interaction
rno04061  Viral protein interaction with cytokine and cytokine receptor
rno04062  Chemokine signaling pathway
rno04144  Endocytosis
rno05145  Toxoplasmosis
rno05163  Human cytomegalovirus infection
rno05167  Kaposi sarcoma-associated herpesvirus infection
rno05170  Human immunodeficiency virus 1 infection
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117029 (Ccr5)
   03260 Virion - Human immunodeficiency virus
    117029 (Ccr5)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    117029 (Ccr5)
   04061 Viral protein interaction with cytokine and cytokine receptor
    117029 (Ccr5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117029 (Ccr5)
 09150 Organismal Systems
  09151 Immune system
   04062 Chemokine signaling pathway
    117029 (Ccr5)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    117029 (Ccr5)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    117029 (Ccr5)
   05163 Human cytomegalovirus infection
    117029 (Ccr5)
   05167 Kaposi sarcoma-associated herpesvirus infection
    117029 (Ccr5)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    117029 (Ccr5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:rno04030]
    117029 (Ccr5)
   04050 Cytokine receptors [BR:rno04050]
    117029 (Ccr5)
   04090 CD molecules [BR:rno04090]
    117029 (Ccr5)
G protein-coupled receptors [BR:rno04030]
 Rhodopsin family
  Chemokine
   CC Chemokine
    117029 (Ccr5)
Cytokine receptors [BR:rno04050]
 Chemokine receptors
  CC Chemokine
   117029 (Ccr5)
CD molecules [BR:rno04090]
 Proteins
  117029 (Ccr5)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx 7TM_GPCR_Srx 7TM_GPCR_Srab
Other DBs
NCBI-GeneID: 117029
NCBI-ProteinID: NP_446412
RGD: 620596
Ensembl: ENSRNOG00000049115
Vega: OTTRNOG00000001625
UniProt: O08556 Q68G28
Position
8:132629097..132660980
AA seq 354 aa
MDFQGSIPTYIYDIDYSMSAPCQKFNVKQIAAQLLPPLYSLVFIFGFVGNMMVFLILISC
KKLKSMTDIYLFNLAISDLLFLLTLPFWAHYAANEWVFGNIMCKLFTGIYHIGYFGGIFF
IILLTIDRYLAIVHAVFAIKARTVNFGVITSVVTWVVAVFVSLPEIIFMRSQKEGSHYTC
SPHFPRIQYRFWKHFQTLKMVILSLILPLLVMVICYSGILNTLFRCRNEKKRHRAVRLIF
AIMIVYFLFWTPYNIVLLLTTFQEYFGLNNCSSSNRLDQAMQVTETLGMTHCCLNPVIYA
FVGEKFRNYLSVFFRKHIVKRFCKHCSIFQQVNPDRVSSVYTRSTGEQEVSTGL
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggattttcaagggtcgattccaacctatatctatgacatcgattatagtatgtcagca
ccctgccaaaaattcaatgtgaaacaaattgcagcccagctcctgcccccactctactct
ctggtattcatctttggttttgtgggtaacatgatggtcttcctcatcctgataagctgc
aaaaagctgaagagcatgactgatatctacctgttcaacctggccatctctgacctgctc
ttcctgctcacactcccattctgggctcactatgctgcaaatgagtgggtctttgggaat
ataatgtgcaaattattcacagggatctatcacattggttattttggtggaatcttcttc
attatcctcctgacaattgataggtacttggctattgtccatgctgtgtttgctataaaa
gccagaacagtcaactttggggtaataacaagtgtagtcacttgggtggtggctgtgttt
gtctctctcccagaaataatctttatgagatctcaaaaagaaggttctcattatacatgc
agtcctcattttccacgtattcaatatcgtttctggaagcattttcaaacattaaagatg
gtcatcttgagcctgatcctacccctacttgtcatggtcatctgctattcaggaatcctc
aacaccctgtttcgctgtaggaatgagaagaagaggcacagggctgtaaggctcatcttt
gccatcatgattgtctactttctcttctggactccctacaacattgtcctcctcctgacc
accttccaggaatactttggactgaataattgcagtagttctaatagactagaccaggca
atgcaggtgacagagactcttgggatgacacactgctgcctcaaccctgtcatctatgcc
tttgttggggagaagttccggaattatctctctgtgttcttccgaaaacacattgtcaaa
cgcttctgcaaacactgttcaattttccagcaagtcaatcctgatcgtgtaagctcagtc
tatacccggtccacaggagaacaggaagtttctactggtttatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (44)   

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