KEGG   Rattus norvegicus (rat): 291759
Entry
291759            CDS       T01003                                 
Symbol
Dsc1
Name
(RefSeq) desmocollin-1 isoform X1
  KO
K07600  desmocollin 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    291759 (Dsc1)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Major cadherins
   291759 (Dsc1)
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR RET_CLD1 Cadherin_3
Other DBs
NCBI-GeneID: 291759
NCBI-ProteinID: XP_038953214
RGD: 1310768
Ensembl: ENSRNOG00000056258
Position
18:complement(11774711..11831868)
AA seq 753 aa
MENSLGPFPQHVQRIQSDFSQNYSIFYSISGPGVDKEPFNLFYIEKDTGDIYCTRSIDRE
EYDQFMVYGYATTADGYAPEYPLPLLFKVEDDNDNAPYFETKLTVFSVPENCRYGTSVGQ
VTAIDKDEPGTLHTRLKYKILQQIPDHPKHFTVHPDTGVITTTTPLLDREKCDTYKLVME
VRDMGGQPFGLFTTGTITISLEDENDNSPCFTQSSYFAEVDENRIDVEILRMMVQDQDLP
NTPHSKAVYKILQGNENGNFKITTDPNTNEGVLCVVKPLNYEVSRQVTLQISVLNEAQFT
NAANTQPPTMCTATVTVKIKDRDEGPECLPPVKVIQSKDGLPAGQQLLGYKAMDPETSSG
EGLRYKMVGDEDNWFEINESTGDLRTVKVLDRESKFVKNNQYNISVVAMDSVGRSCTGTL
VVLLEDFNDHPPQIDKDITICQQEKDYAVLEPVDLDGPDNGPPFQFLLDNSSSKLWTLES
QDGKRAILRQRHNLNYNYYSVPIQIQDRHGFSAKHVLSVRVCDCTIPSECRMAIEERDVK
PNVILGKWAILAMVLGSALLLCILFTCFCVTTTKRTVKKCFPDDVAQQNLIVSNTEGPGE
EVTEANIRLPTQTVNICDTSTSVGTLGGQGIKTQQNFEMVKGGYTLESNKGGGHHTLESS
KGGVLGAADTGRYAYTDWQTFTQPRLGEKVYLCGQAEEHKHCDDYVRSYNYEGKGSMAGS
VGCCSDRQEEEGLEFLDHLEPKFRTLAKTCVKK
NT seq 2262 nt   +upstreamnt  +downstreamnt
atggagaactcactgggtccatttccacagcacgttcagaggatccaatctgattttagc
cagaattattccatcttttactctatcagcggaccaggtgtggacaaagagcctttcaat
ttgttctacatcgagaaagacactggggacatctattgtacccgaagcattgaccgtgaa
gagtatgaccaatttatggtgtatggatatgcaaccactgctgatggctatgccccagag
taccctctgcctctgctcttcaaggtagaagatgacaatgacaatgccccatattttgaa
accaaactgacagtttttagtgtgcctgaaaattgtcgatacggaacttcagtgggacaa
gtgactgccatagacaaggatgagccaggaaccctacacactcgtctgaagtacaaaatc
ttgcaacaaatcccagatcaccccaagcacttcaccgtccacccagacacgggtgtgatc
actaccaccacacctttactggacagggagaaatgtgatacttacaaactagtgatggag
gtacgagacatggggggccagcccttcggtctcttcaccaccggaacgatcaccatctca
ctggaggatgagaatgacaattcaccgtgtttcacccaaagttcttattttgcagaagta
gacgaaaacagaattgatgttgagattctaaggatgatggtgcaagaccaagatttgccc
aacaccccccactcgaaggcggtatacaaaatcctacaggggaacgagaatgggaacttc
aaaatcacaacagatccaaacacaaatgaaggagtcttgtgtgttgtcaagccattgaac
tatgaagtcagccgccaagtcactctgcaaatcagcgtgcttaacgaagcccagttcact
aatgccgccaacacacaacccccaacaatgtgcaccgcaaccgtcactgtgaaaattaaa
gacagagatgagggtcctgagtgcttgccaccagtcaaagtcattcagagcaaagatggg
ctcccagctggccaacagctcctgggctacaaagcgatggacccagaaacaagcagtggc
gaaggcttaaggtataaaatggtaggagacgaagataactggtttgagattaacgaaagc
acaggagacttgagaaccgtgaaagttctagaccgagagtcgaagttcgtgaagaacaac
cagtacaatatttccgtggtggcgatggattcagttggccgatcttgcacaggaacactg
gtagtccttctggaagattttaatgaccacccaccacagattgacaaggacataaccatt
tgtcagcaggaaaaggattatgccgttttggaacccgtagatctagatgggccagataat
ggtccacctttccagttccttctggataattcttccagcaaactttggactctagagtca
caggatggtaaacgtgccattcttcggcaacgacacaatcttaattataactactattct
gtgccaatccaaatacaagacagacatggtttttctgcaaaacatgtattatcagtgcga
gtgtgtgactgtacaattccatcagaatgtagaatggccattgaggagagggatgttaaa
ccaaatgtaatccttgggaaatgggccattctcgccatggtcctgggatctgcattgcta
ctgtgcattttatttacatgcttctgtgtgactactactaagagaacagtcaagaaatgc
ttcccagatgatgtagcccagcaaaatttaattgtatcaaacaccgaaggaccaggagaa
gaagtgacggaggcaaatattagactccccacacagacagtcaacatctgtgatacaagc
acatctgttgggactcttggtggccaaggaatcaaaacacagcaaaattttgagatggtc
aaaggaggctacaccttggagtccaacaaaggaggtggccaccataccttggagtccagc
aaaggaggtgtgctaggagcagcagacactggccgatatgcttacactgactggcaaact
ttcactcaacctcggctcggcgaaaaggtgtatttgtgtggacaagctgaggaacacaag
cattgtgatgactacgttcgctcatataactatgaaggcaaaggctccatggctggttct
gtgggttgctgcagtgatcggcaggaggaagaagggctagagtttttagatcacttggaa
ccgaaatttaggacattagcaaagacatgtgtgaagaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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