KEGG   Rattus norvegicus (rat): 308232
Entry
308232            CDS       T01003                                 
Symbol
Zfp54
Name
(RefSeq) zinc finger protein 51
  KO
K09228  KRAB domain-containing zinc finger protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    308232 (Zfp54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    308232 (Zfp54)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    308232 (Zfp54)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 KRAB zf-C2H2_6 Zn-ribbon_8 zf-C2H2_jaz zf-met C1_1 zf-C2H2_11 zf_C2H2_ZHX DUF6076 Zn_ribbon_SprT
Other DBs
NCBI-GeneID: 308232
NCBI-ProteinID: NP_001100937
RGD: 1307738
Ensembl: ENSRNOG00000051578
UniProt: A0A0G2K3R3 B5DEZ5
Position
1:69864213..69876881
AA seq 586 aa
MADSSVNTSQCLLTFRDVAVDFSQEEWECLASPQRALYIDVMLENYSNLVSVENYCICDT
VCQPVKTERESCQCNELGKMLHDPSHGGLYKRSDTTETSNNYRCCKDRDVSVDSSNPDQH
KSTHTGEEPCTSEDCEKSFDLCSNITQDQTFYTEEKEHRQEKHDDHFSSTYSLMQQSIYI
GANAGQCVKYGKCFSIASSLSIQQRIDTGNKPYKCNICDKSFTQCSSLKTHRKTHQRLRA
GTKPYKCSDCEKSFSYLSALKSHQKRHTGEKRYKCKECDKSYAYRTGLKRHQKIHTAKER
YSCQHCGKVFHQLSHFKSHFTVHSAEKPYKCNECHRSFPHYVFFRRHKKNHSLQKSHKCK
ECGKSFFILSHLKTHYRIHTGEKPYKCTECDKSFTQYSHLRRHQRIYTGKKLYRCEVCDK
WFTMSSSLSRHQKIHTEAKTYKCKDCDIFFTHYSSLRRHQRVHTGEKHTCKQCGKSFTRG
STLRAHQRIHTGEKPYKCSKCDKSFIQASQLRTHQRVHTGERPYVCKECGKSLTTCAILR
AHQKIHTGEKPYKCMECGKSYIQYSHLKRHQKVHTGEKHTIVNNVT
NT seq 1761 nt   +upstreamnt  +downstreamnt
atggctgattcttcagtcaacacgtcccagtgtctgttgacattccgggatgtggctgtg
gacttctcccaagaggagtgggaatgtctggcctctcctcagagggctttgtacattgat
gtgatgttggagaattacagcaacctggtctctgttgagaactactgcatatgtgatact
gtctgtcaacctgtgaagactgaaagggagtcctgtcagtgtaatgagcttggtaaaatg
cttcatgatccctctcatggtggactttacaaaagaagtgacaccacagaaacctctaat
aactacagatgctgtaaggacagggatgtctctgttgactcatcaaacccagatcaacat
aaaagcacgcacactggggaagaaccttgcacatctgaagactgtgagaagtctttcgat
ttgtgttccaacattactcaagatcagacattctacactgaagagaaagagcacagacag
gaaaaacatgatgaccatttcagctctacatacagtctcatgcaacagtcaatctacatt
ggagcaaatgcaggccagtgtgtaaaatatgggaaatgtttcagtattgcttcaagcctc
agtatacagcagagaattgatactggaaacaaaccctacaagtgcaatatttgtgacaaa
tcttttactcagtgctcaagtcttaaaacacatcgtaaaacacatcaaagacttcgtgct
gggacaaaaccttacaaatgcagtgactgtgaaaagtctttctcttatttatctgcactt
aaaagtcatcagaaaaggcatactggagagaagaggtacaagtgtaaggaatgtgacaaa
tcctatgcctaccgtactggtttgaagagacatcagaaaatccatactgcaaaggaacgt
tatagttgtcaacactgtggcaaggtctttcatcagctctcacacttcaaaagccatttc
acagtccattctgcagagaagccttacaaatgcaatgagtgccacagatcctttccccat
tatgtattcttcagaaggcataagaaaaatcattctctacagaaatctcacaaatgcaaa
gaatgtggtaagtccttttttatattgtcacatcttaaaactcattacagaatccatact
ggtgagaagccttacaaatgtacagaatgtgacaaatcctttacccagtactcacatctt
cgaagacatcagagaatttatactggaaagaaactttacagatgtgaggtatgtgacaaa
tggtttactatgtcctcaagtctcagcagacatcagaaaattcacactgaagcaaaaact
tataaatgcaaggactgtgacatattctttacccactactcaagtcttagaagacatcag
agggttcatactggagaaaaacatacatgtaaacagtgtggcaaatcttttactaggggc
tcaactcttagagcacatcagagaattcatactggagagaaaccttacaaatgtagtaaa
tgtgacaaatcctttatccaggcctcacaacttagaacacatcagagagttcatactgga
gagagaccttatgtatgtaaggaatgtggcaaatcacttactacatgtgcaattcttaga
gcacatcagaaaattcatactggagagaaaccttacaaatgtatggaatgtggcaaatcc
tatattcagtactcacatcttaaaagacatcagaaagttcatactggagagaaacataca
attgtaaataatgtgacatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (37)   

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