KEGG   Rattus norvegicus (rat): 312915
Entry
312915            CDS       T01003                                 
Symbol
Arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
  KO
K18442  brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    312915 (Arfgef1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    312915 (Arfgef1)
Membrane trafficking [BR:rno04131]
 Endosome - Golgi transport
  Arf GTPases and associated proteins
   Arf GTPase associated proteins
    312915 (Arfgef1)
SSDB
Motif
Pfam: Sec7 BIG2_C Sec7-like_HUS DCB Sec7-like_HDS
Other DBs
NCBI-GeneID: 312915
NCBI-ProteinID: NP_001263985
RGD: 1560793
Ensembl: ENSRNOG00000005703
UniProt: D4A631
Position
5:13764507..13859237
AA seq 1846 aa
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKVETEKQSPPHGEAKA
GSGTLPPVKSKTNFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGSAPDST
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMERERHRQQHHLLQSPVSHHE
PESPHLRYLPPQTVDHIAQEQEGDLDPQTHDVDKSLQDDIEPENGSDISSAENEQTEADQ
ATAAETLSKDDVLCDGECEEKPQDIVQSIVEEMVDIIVGDMGEGTAVSASADGNAGAVED
GSDSENVQANGIPGTPISAAYTPSLPDDRLSVSSNDTQESGNSSGPSPGAKFSHILQKDA
FLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAIKQ
YLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFD
HKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNV
QELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPSEQEISEIKHPETINRYG
SLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQ
GMLGTTPEDIAQFLHQEERLDSTQAGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRL
FLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQV
KNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSTKQNVAS
EKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVG
LQDCDDTDVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNI
DTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSLTGT
KDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDF
VRWLCAVSMDELLSTTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPN
EDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQM
VNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTSGHIVTLVFEKHFPATIDSFQDA
VKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVRGWF
PILFELSCVINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQ
QTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNC
LENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPTSGEAAPPSPSAMSEKQLD
AISQKSVDIHDSAQPRSSDNRQQAPLVSVSPASEEVSKGRPTAKFPEQKLFAALLIKCVV
QLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVRVDTQDQGMYRFLTSQQLFKLL
DCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYTDESR
VSAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDNRFKAHASFY
YPLLCEIMQFDLIPELRAVLRRFFLRIGIVFQISQPPEQELGINKQ
NT seq 5541 nt   +upstreamnt  +downstreamnt
atgtatgagggcaagaagacgaagaacatgttcctgacccgggccctggagaagattttg
gccgacaaggaagtgaagaaggcgcatcactcccagctgcgcaaagcgtgcgaggtggcc
ctagaggaaataaaagttgaaactgagaaacaaagtcctcctcatggagaagcaaaagct
ggatcaggcacccttccaccagtgaaatcaaagacaaattttattgaagcagacaagtac
ttcttaccctttgagttggcatgccagtccaaatgtccccgcatagttagtacatctcta
gactgtttgcagaaacttattgcttatgggcacttgactggcagtgctccagatagtacg
acaccaggcaaaaagttaattgatagaattattgaaacaatatgtggctgcttccaaggc
cctcaaacagatgaaggagttcagttgcagataataaaggctttacttactgcagtaaca
tcacaacacatagaaattcacgaaggaactgtgctgcaagctgtgaggacatgctacaat
atctatttagccagcaaaaatctcatcaatcagacaacagccaaagctactcttactcag
atgctaaatgttatctttgcacgcatggaaaaccaagcattacaggaagccaaacaaatg
gaaagagaaagacatcggcagcagcatcacttgttacagtctccagtaagccatcacgag
cccgagtcacctcatcttagatatttgccacctcagactgttgatcatatagcccaagaa
caggaaggggatcttgatccccaaacacacgatgtggataaaagtctccaagatgacata
gagcctgagaacggatctgatatttccagtgcagagaatgaacagacagaagctgatcag
gcaactgcagctgaaacattatctaaagatgatgtgttgtgtgatggagagtgtgaggaa
aagccacaggatattgtgcagagcattgtggaagagatggtggacatcattgttggagac
atgggggaaggaacagctgtaagtgcaagtgcagatggcaacgctggagctgtagaggat
ggcagtgacagtgagaacgtgcaagccaatgggatcccgggaacacccatctctgccgca
tacacaccatcgttacctgacgacagattgtctgtctcctccaatgatactcaggaatct
ggaaattcttcaggaccttcacctggtgctaagttttcccacattttacaaaaggatgcc
tttctagtgttcaggtcattgtgtaagctgtcaatgaaaccactgtcagatggaccacca
gatccaaagtctcatgagttacggtccaagattctttcattgcagttgcttctgtccatt
ctgcagaatgcaggacctgttttcaggacaaatgagatgtttattaatgctatcaagcag
tatctgtgtgttgcactctcaaaaaacggagtctcatctgttccagaggtttttgagctt
tctctttccatatttctaactttgttgtcaaacttcaagacacatctgaagatgcaaatt
gaggtattctttaaagaaattttcctgtacattttggaaacttctacaagctcatttgat
cataagtggatggtgattcagacactgacaaggatctgtgcagatgctcagagtgtggtg
gatatttatgtaaattatgactgtgacttgaatgcagcaaatatatttgaaagactagta
aatgacctgtcaaaaattgcccaaggaaggggcagtcaagaacttgggatgagtaatgtt
caggaattgagcctgcggaaaaaggggttagaatgtttagtttcaattcttaagtgtatg
gttgaatggagtaaggatcagtacgtgaatcccaactctcaaaccacccttggtcaggaa
aaaccctcagagcaagagataagtgaaatcaaacaccccgagactataaacagatatgga
agtttaaactccttagaatccacatcatcttcagggattggcagctacagcacacagatg
tctggcactgataatccagaacaattcgaggtcctaaagcagcaaaaagaaataatagaa
caagggattgatttatttaataagaaaccaaagagaggaatacagtacctccaagaacaa
gggatgcttggcaccactcctgaagatatagctcagttcttacatcaagaagaaagatta
gactctacacaggcgggggagttcctgggagataacgataagttcaataaggaagtcatg
tatgcatatgtagaccagcatgacttttcgggaaaagactttgtttcagctcttcgtctg
tttctggaaggattccggcttccaggagaagctcagaaaattgatcgattaatggaaaaa
tttgctgcaagatacctagagtgcaaccaaggacaaaccctttttgctagtgcagatact
gcttatgttttggcctactcaattatcatgttgaccacagaccttcacagtccacaggtt
aaaaacaaaatgacgaaagaacagtatattaaaatgaatcgtggtatcaatgacagtaaa
gatctccctgaagagtatctatctgccatttataatgagatagctgggaaaaaaatatca
atgaaagaaacaaaagaactaacaatccctacaaaatcaactaaacagaatgtagccagt
gaaaagcaaagacgacttctgtataatttagaaatggaacagatggccaagacagctaaa
gcactcatggaagctgtgagccatgttcaggcaccttttacaagtgcaacacacttggag
cacgtgaggcctatgtttaagttggcttggaccccttttctggctgccttcagtgtgggt
ctacaagactgtgatgatactgacgtggcctctctctgcctcgaagggatacgatgtgcg
atcagaattgcatgcatcttcagcattcagctggaaagagatgcatatgtccaggcacta
gccagatttaccttacttacagtgagttctggtattactgaaatgaaacagaagaatatc
gacacaataaaaacactcatcacagtggctcacacagatggaaattatttaggaaattcg
tggcatgagatcctgaagtgcattagtcagttagagcttgcacaacttataggaactgga
gtgaagcctcggtacatttctgggaccgtgagaggcagagaagggtctctcactgggaca
aaagatcaggctccggatgaatttgttggtctggggctagttggaggaaatgtggactgg
aagcagatagccagtattcaggagtctattggagaaaccagttctcaaagtgtcgtggtt
gctgtagacagaatattcacaggatccacaaggctagatggaaatgctattgtcgatttt
gttcgttggctctgtgccgtgtctatggatgaattgctttccactacacacccaagaatg
tttagtctacaaaaaatagtagaaatatcatactataacatgggaagaataagactgcag
tggtctcggatttgggaagttattggagatcattttaataaggttggttgcaatcctaat
gaagatgtagccatatttgcagtagactccctgaggcagctatcgatgaagtttttagag
aaaggagagcttgcaaacttcagattccaaaaggatttcttaagaccttttgaacatata
atgaaacgaaacaggtctccaacaattcgagatatggtcgtgcgttgtatagcgcagatg
gttaactctcaggctgccaatatccgttcaggatggaagaacattttctcggtgttccac
ctagctgcatcagaccaggatgagagcatagtagagctagcattccagacgagcgggcac
atcgtcactcttgtatttgaaaagcactttccagccactattgattctttccaggatgca
gtgaagtgtttatctgaatttgcgtgtaatgcggctttcccagacacaagtatggaagca
atccgacttattcgccattgtgcaaaatatgtgtctgatagacctcaggctttcaaagag
tacacaagtgatgacatgaacgtggcacctgaagacagggtgtgggtgagagggtggttc
ccaatcctctttgagttgtcctgtgtcatcaatagatgcaaattagatgtaagaaccagg
ggcttaacagtgatgtttgaaataatgaaaacatacggccacacttacgaaaaacactgg
tggcaggacttgttcagaattgttttcagaatctttgacaacatgaagttgccagaacag
cagacagagaaagctgaatggatgacaacaacttgtaaccatgccctttatgcgatatgc
gacgtgttcacccagtatttagaagtcctcagtgatgtacttttggatgatatttttgcc
cagctttactggtgtgtacaacaagacaatgagcagttagcacgatctggtacgaactgc
ttagaaaatgtggttattctgaatggtgagaagtttactctagaaatctgggataaaacc
tgtaattgcaccctggatatcttcaaaaccacaattcctcatgcgcttctgacttggcgt
cctacttctggagaggctgcccccccatctccatcagctatgagtgaaaagcagttggat
gcaatatcacagaaatctgtagacatacatgattctgctcaaccaagatcttcagataac
aggcagcaagcaccacttgtttctgtttctcctgcgagtgaagaagttagcaaagggaga
cccacagcaaaattcccagaacaaaaattgtttgctgccctgttgattaaatgtgttgtg
cagctggaactcatccagaccatcgacaacattgtgttcttcccagccacaagcaagaag
gaagatgcagaaaacttagctgcagcccagagagatgcagtggacttcgatgttcgagtt
gatactcaagaccaaggaatgtaccgctttttaacatcacaacaactcttcaagctactg
gactgcttattagagtcacatagatttgcaaaagcatttaattccaacaatgaacagagg
actgctctatggaaagcaggcttcaaaggcaagtccaagcccaatctcctaaaacaagag
acaagcagcctggcgtgtggactgcgcatcctcttccggatgtacacagacgagagcaga
gtcagcgcctgggaggaggtccagcagaggcttttaaacgtctgcagtgaggcactgagt
tacttcctcactctaacatctgaaagtcaccgggaagcctggaccaacttactgttactg
ttcctcactaaagtcctcaagatcagtgacaacaggtttaaagctcacgcatcattctac
taccctctgttatgtgaaattatgcaatttgacttgattcctgaacttcgtgctgttctt
agaagatttttcctgcgaattggaatagtatttcagatatcacaaccacctgaacaggaa
cttgggataaacaagcaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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