KEGG T01003: 312937

Rattus norvegicus (rat): 312937

Entry

312937 CDS T01003

Gene name

Cyld, LRRGT00003, Rp1, Rp1h

Definition

cylindromatosis (turban tumor syndrome) (EC:3.4.19.12)

Orthology

K08601

ubiquitin thioesterase CYLD [EC:3.1.2.15]

Organism

rno Rattus norvegicus (rat)

Pathway

rno04380	Osteoclast differentiation
rno04622	RIG-I-like receptor signaling pathway

Class

Organismal Systems; Immune system; RIG-I-like receptor signaling pathway [PATH:rno04622]
Organismal Systems; Development; Osteoclast differentiation [PATH:rno04380]

SSDB

Motif

Pfam:

CAP_GLY UCH COX_ARM

Other DBs

NCBI-GI:

NCBI-GeneID:

RGD:

Ensembl:

UniProt:

Position

19p11

AA seq 953 aa
MSSGLWNQEKVTSPYWEERLFYLLLQECSVTDKQTQKLLRVPKGSIGQYIQDRSVGHSRV
PSAKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERLSLFRNRIRLS
KGLQVDVGSPVRVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGV
YQGKQLFQCDEDCGVFVALDKLELIEDDDNGLESDFAGPGDTVQVEPPPLEINSRVSLKV
GESTESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFASVESTVLLHIN
DIIPDSVTQERRPPKLAFMSRGVGDKGSSSHNKPKVTGSTSDPGSRNRSELFYTLNGSSV
DSQQQSKSKNPWYIDEVAEDPAKSLTEMSSDFGHSSPPPQPPSMNSLSSENRFHSLPFSL
TKMPNTNGSMAHSPLSLSVQSVMGELNSTPVQESPPMPSSSGNAHGLEVGSLAEVKENPP
FYGVIRWIGQPPGLSDVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPDS
RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYL
DSTLFCLFAFSSALDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLR
KILEKVEAASGFTSEEKDPEEFLNILFHDILRVEPLLKIRSAGQKVQDCNFYQIFMEKNE
KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDLLED
TPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCSTQVHLHPRRLNHTYHPVSLPKD
LPDWDWRHGCIPCQKMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNI
PQVTPCPEVGEYLKMSLEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK

NT seq 2862 nt +upstreamnt +downstreamnt
atgagttcaggcctgtggaaccaagagaaagttacttcaccctactgggaagaacggctt
ttttatctgcttcttcaagaatgcagtgtaacagacaaacagacacagaagctcctgaga
gtacccaaagggagcataggacagtacatccaagaccgttccgtggggcattcaagagtt
ccttctgctaaaggcaagaaaaatcagattggattaaaaatcttagagcaaccgcatgca
gttctgtttgttgatgaaaaggatgttgtagaaataaatgaaaaattcacagagttactg
ttggcaattaccaactgtgaggagaggctcagcctatttagaaacagaatccgactaagt
aaaggcctccaggtagacgtgggcagtcctgtgagagtacagctgcgatctggggaggag
aagtttccaggagttgtacgcttcagaggacctttattagcggagaggacggtgtcgggg
attttctttggagtagaattactggaagaaggtcgtggccaaggtttcactgatggggtg
tatcaaggaaaacagctcttccagtgtgatgaggactgtggcgtttttgttgcattggac
aagctggagcttatagaagatgatgacaatgggttggaaagtgattttgcaggcccagga
gatacagtccaggttgaacctccccctttggaaataaactccagagtttctttgaaggtt
ggagaaagtacagaatctggaacagtgatattctgtgatgttttaccaggaaaagagagt
ctaggatattttgttggtgtggacatggataaccctattggcaactgggacggaaggttt
gatggggttcagctttgcagttttgcaagtgttgagagtacagttctcctacacatcaat
gacatcatcccagatagcgtgacacaggaaaggagacctcccaaacttgcctttatgtca
agaggtgtaggtgacaaaggttcatctagtcataataaaccaaaggttacaggatctacc
tcagaccctggaagtagaaacagatctgaattattttataccttaaatgggtcatctgtt
gactcacaacaacaatccaagtccaaaaacccatggtacattgatgaagttgcagaagac
cctgcaaagtcacttacagagatgtcttcagacttcggacattcatcgcctccaccgcaa
cctccttccatgaactccttgtctagcgagaacagattccactccttacccttcagcctg
acaaagatgcccaacactaatggcagcatggctcacagtccactctctctgtcagtgcag
tctgtgatgggagagctgaacagcactcctgtccaggagagtccacccatgcccagctct
tctgggaatgcacacgggctagaggtgggctcactggctgaagtaaaagagaaccccccg
ttctatggggttatccgttggattggccagccaccagggctcagtgacgtgcttgctgga
ttggaactggaagatgaatgcgcaggttgtacggatggaactttcaggggcacgcgctat
ttcacctgtgccctgaagaaagcactgttcgtgaaactgaagagctgcagaccagactct
aggtttgcatccttgcagcctgtttccaatcagatcgaaaggtgtaactctttagcattt
gggggctacttaagtgaagtagtagaagaaaatacgccacctaaaatggaaaaggaaggt
ttagagataatgattggaaagaagaaaggcatccagggccattacaattcttgttactta
gactcaactttattctgcttatttgcttttagttctgccctggacactgtattacttaga
cccaaagagaagaatgatgtagagtattacagtgagactcaagagctactgaggacagag
atagtcaatcctctgagaatatatggatatgtgtgtgccacaaagattatgaagctgagg
aaaatacttgaaaaagttgaggctgcatcaggatttacctctgaggaaaaagatcctgaa
gaatttctaaacatcctgtttcatgatattttaagggttgaaccattgttaaaaataagg
tcagcaggtcaaaaagttcaagactgtaacttctatcaaatttttatggaaaaaaatgag
aaagtcggagtacccacaatccagcagttattagaatggtcttttatcaacagcaacctg
aaatttgcagaggcaccatcatgcttgattatccagatgcctcggtttgggaaagacttt
aaactatttaaaaaaatttttccttccctggaattaaatataacagatttacttgaagac
actcccaggcagtgccgcatctgtggaggactcgccatgtatgagtgtagagagtgctat
gatgacccggacatctcggcagggaagatcaagcagttctgtaagacctgcagcactcag
gttcaccttcatcccagaagactgaatcacacttaccatccagtatcacttcccaaagac
ttgcccgactgggactggagacacggctgcatcccgtgtcagaagatggagttatttgct
gtgctctgcatagaaaccagccactatgttgcttttgtgaagtacgggaaggatgactct
gcctggctcttctttgacagcatggctgatcgagatggtggtcagaatggcttcaacatt
ccacaagtgacaccctgcccagaagtaggagagtacttgaagatgtctctggaggacctg
cactctttggactccagaaggattcaaggctgtgcgcgcagacttctttgcgatgcatac
atgtgcatgtaccagagtccaaccatgagcttgtacaaataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   UniGene (2)   
   ENSEMBL-RNO (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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