KEGG   Rattus norvegicus (rat): 317435
Entry
317435            CDS       T01003                                 
Symbol
Shroom2
Name
(RefSeq) protein Shroom2
  KO
K18625  protein Shroom
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    317435 (Shroom2)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     317435 (Shroom2)
SSDB
Motif
Pfam: ASD2 ASD1 PDZ PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 317435
NCBI-ProteinID: NP_001041358
RGD: 1565163
Ensembl: ENSRNOG00000024322
UniProt: D4A053
Position
X:complement(25308163..25480194)
AA seq 1491 aa
MEGAEPRARPERLAEAEARATDGVRLVEVQLSGGAPWGFTLKGGREHGEPLVITKIEEGS
KAASVDKLLAGDEIVAINDVTLSGFRQEAICLVKGSHKTLKLVVKRKSDPSWRPHSWHAT
KYFDVHPEPPVSLFLNSSSSPSWKSQHQASSSSHDLSGSWEHTSLQRTSDHFSSMGSIDS
LDHSSQLYPSGHLSSAKSNSSIDHLGGHSKRDSAYGSFSTCSSTPDHTLPKADASSTENI
LYKVGLWEASRPGSSRQSQSTGDPQGLQDRPSSFLPRVPGNSSKSPRPEDNIEPKIATSG
RSNFGPVWYVPDKKKAPSPPPLGLPLRSDSFAVAARGHEKARGPPFSDLASMQHFTTLPH
VQPRGDRRMETTDRQWKLAHPSSGKEIGNVGYQPEGHLDCRWLCSDDRAGRPSGAPGRHQ
FSLSSTDVHFLKSYHGSQHPQPCSDESPRFPSSPRELLRITPSGCLQEPPELSQDDNPAQ
VRWPGSVNQKLDDRGRSHYFSVPHRQPVHGSAHVLIPRSDYWHSDTTPVDLECPLLRPDQ
RGYPQQYEETPASHERGGYQQLNAGIEGCCSGIHEPPRASHTVRAGLQCPGNDFKLVDAE
SGRISRQRTPMLHSLTQDGAWRPGNSKDCGNEKPPLLDAQVGKPTRRSDRFATTLRNEIQ
MRRAKLQKSKSTVTLAGDSEAEDCAGDWRVDVGAVPEGSFPSTYKEHLKEAQTRVLKATS
FQRRDLDPTPADQYPGPPEHRTCDHSASSSLSSFPGEPDSAPRLCEAGLAKPPSSAGGVP
HILRIGGRKRFTAEQKLKSYSEPEKINEVGLSGDHSPHPTIRTSEDSVGTFADRWKFFEE
TSKSLLQKPGHRQAFCGIPREKAERPQTQGHECESTEPWFQKRSRATSCGEILSEDRKVE
KASEKLNPPRRLGTFAEYQASWKEQKKSLEARSSGRYHSADDILDAGLDQQQRPQYIHER
SRSSPSTDHYSQEVPVEPNRQAEDSGGQKEALLCTLQAEEGCSAPSSSVLSSAQPQDSQH
VNEDPTSPQPEAQLSSKCQHLQTSTMETSRSPSPQFAPQKLTDKPPLLIHEDNSARIERV
MDNNTTVKMVPIKIVHSESQPEKESRQSLACPAELPALPSGLEKDQIKTLSTSEQCYSRF
CVYTRQEVETPHRARPPEPQPPSTPAPPVRDSCSSPPSLNYGKAKEKTVDDLKSEELARE
IVGKDKSLADILDPSVKIKTTMDLMEGIFPKDEYLLEEAQQRRKLLPKVPSPRVTEDKKQ
DPGMPGVVSLATNSTYYSTSAPKAELLIKMKDLQEPEEYSAGDLDHDLSIKKQELIDSIS
RKLQVLREARESLLEDIQANNALGDEVEAIVKDVCKPNEFDKFRMFIGDLDKVVNLLLSL
SGRLARVENALNNLDDSPSPGDRQSLLEKQRVLTQQHEDAKELKENLDRRERIVFDILAT
YLSEENLADYEHFVKMKSALIIEQRELEDKIHLGEEQLKCLFDSLQPERSK
NT seq 4476 nt   +upstreamnt  +downstreamnt
atggagggcgccgagccccgtgcacggcccgagcgcttggctgaagctgaggcgcgggcg
accgacggcgtccgtctggtggaggtgcagctgagcggcggtgccccttggggcttcacc
ttgaagggcggccgcgagcatggtgagcctctggtcatcaccaagatcgaagaaggaagc
aaagctgcatcagtggacaagcttcttgctggagatgagatagtggccatcaatgatgtc
actctctcagggttcagacaagaagcaatttgcctggtgaaaggctcccacaagaccctc
aagcttgtggtcaaaaggaaaagtgatccaagttggaggcctcactcctggcatgctacc
aagtacttcgatgtccaccctgagccaccagtctcactgtttctgaactccagcagttcc
ccttcctggaagagccagcaccaggctagttcttcctcccatgatttatctggctcatgg
gagcacaccagcctacagcgcacttctgaccacttcagctccatgggcagcatagacagc
ctggaccacagctcccagctctacccatctggtcacctctcatctgccaagtccaacagc
agcattgaccacctgggtggccatagcaagcgagactcggcttatggctccttttccacc
tgttccagcacccctgaccacaccttgcccaaggctgacgcctcatccactgagaacatt
ctctacaaagttggcctttgggaggcttccaggccaggcagcagccgacaaagccagtct
acaggtgatcctcagggactacaggacaggccatcgtctttcttacctagggttcctggt
aacagtagtaaaagcccaaggccggaggataatattgagcccaaaatagcaacttctggg
agatccaattttgggcctgtctggtatgttcctgataagaaaaaagccccttctccccca
cctcttggacttcctttgcgcagtgatagctttgctgtggcagccaggggccatgaaaag
gctcggggccctccattctcagacttggccagcatgcagcactttaccaccctgcctcat
gtacaaccccggggagaccgcagaatggaaactactgatcgacagtggaagcttgcacac
ccaagcagtggcaaagaaataggtaatgtgggttaccagccagaaggccacctggattgc
cgttggctgtgctctgatgatagggcaggtaggccctcaggagctccaggaagacaccag
ttctccctgtccagcacagatgtgcactttctgaagtcttaccatgggagccaacaccca
cagccgtgcagtgatgagagcccaagattcccctcatcaccaagggaattgcttcgtata
actcctagtggatgtctgcaggagcctcctgaactgtctcaggatgacaaccctgctcag
gtgaggtggcccggttctgttaaccagaagctagatgacagagggcggagccactatttt
tctgtgccccacaggcagccagtgcacgggagtgcccacgttttgataccccgaagtgac
tattggcattcagacacaactcctgtggaccttgagtgtcctctcttacgcccagaccag
aggggctacccacagcagtatgaggagaccccagcctctcatgagagaggcgggtatcaa
cagctaaatgcagggattgaaggctgctgctcaggaatccatgagcctcctagagccagc
cacactgtgagagctggtctgcagtgtcctggcaatgacttcaagttagtggatgcagag
agtggaagaatttctcgtcagagaacacccatgctgcactctctgacccaagatggtgca
tggaggcctgggaacagcaaggattgtggaaatgagaagccaccactgcttgatgcccag
gtgggtaaacccacacggaggagtgaccgttttgccacaacactaaggaatgagattcag
atgcgcagagcaaagctacagaagagcaaaagcacagtgacattagctggagatagtgaa
gctgaagactgtgctggagactggagagttgatgtgggggctgttccagaaggttccttc
cccagcacctataaagagcacctgaaggaggcccagacacgtgttctaaaggccacctct
ttccaacgccgagatttagatcccaccccagcagatcagtatccaggaccaccagaacat
aggacttgtgaccacagtgcctcatcttctttatcttctttccctggggagccagactct
gcccctcgcctctgtgaagcaggtctggccaagccaccctcttctgcaggtggtgttccc
cacattcttcgaattggaggccggaaacggttcacagcagagcagaaactaaagtcctat
tctgagccagaaaaaattaatgaagtggggctttcaggggaccacagtcctcatcctact
attaggacatctgaggattctgtgggtacatttgctgataggtggaagttttttgaggaa
acaagcaaatctcttctccagaagccaggccataggcaagctttctgtgggatcccaaga
gaaaaggctgagaggcctcaaacacagggccatgagtgtgagagtacagagccctggttt
cagaagaggtcacgggccacctcttgtggagagatcctcagtgaagacagaaaagtagaa
aaggcctcagagaaattgaacccacccagaaggcttggaacctttgcagaatatcaagca
tcttggaaggagcagaagaaatctctagaagccaggagttctggacgataccattcagca
gatgatattctggatgctggcctagatcagcagcagaggccacagtacattcatgaacgg
tctcgttcatcaccgtccacagatcactattcacaggaagtgcctgttgaaccaaacagg
caggcagaggactctggtggccagaaagaagcacttctttgtacactgcaagctgaagag
ggatgctctgctccaagctcctctgtgctcagcagtgcccagccgcaagacagccagcat
gtgaatgaggacccaacttcccctcaaccagaagcccagctctcctccaagtgtcaacac
ttacagacatcaaccatggaaacttctcgctccccttcacctcagtttgccccacagaag
ctgacagacaagcctcccctgcttatccatgaagacaattcagcaagaattgagcgggtg
atggacaacaacaccactgtgaagatggtgcccataaaaattgtgcactcagaaagccag
cctgagaaggaaagccgccagagtctcgcttgcccagccgagctgcccgcactgcccagt
gggctggagaaggaccagatcaagacactgagtacatcagagcagtgctactcgcgcttt
tgtgtgtacacacgacaggaggtggaaacccctcatagagcccgccctccagagccccag
ccacctagcacccctgcacctcctgtcagagatagctgttcctctcctccctcactcaac
tatgggaaggccaaggagaagaccgtggacgacttgaagtctgaagaattagccagagag
attgtgggaaaggacaagtctttggctgacatcctggaccccagcgtgaaaatcaaaact
accatggatctgatggagggaattttccccaaagatgagtacctcctagaggaagctcag
caacggaggaagctgctccccaaagtcccctcacccagagtcacagaggacaagaaacag
gacccaggtatgccaggggttgtgtccttggccacaaattctacctattatagcacatca
gcccccaaggcagaactgcttatcaagatgaaggacctacaggagcctgaggagtattca
gcaggtgacttggatcatgacctttccattaagaagcaagagctcatcgacagtatcagc
cgcaagctgcaggtgctccgagaagcacgtgagagtctgctggaggacatccaagccaac
aatgctctcggggatgaagtggaagccattgtgaaagatgtctgcaagcccaatgagttt
gacaagttccggatgttcattggagacctggacaaagtggtgaacctcctgctgtcactg
tcaggacgcctggcccgtgtggaaaatgcccttaataatttagatgacagtccttctcct
ggagatcggcagtcactgttggagaaacagagagtcctaactcagcagcatgaggatgcg
aaggagcttaaagagaacctggaccgtcgtgagcgcattgtgttcgacatcctggccacc
tacctcagcgaggagaacctggctgactatgagcacttcgtgaagatgaagtcagccctc
atcattgagcagcgagagctggaagataaaatccacctgggtgaagaacagctcaagtgt
ttgtttgacagcctgcagcctgagagaagcaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (20)   
   RefSeq(nuc) (10)   
   GenBank (5)   
   EMBL (5)   
Protein domain (5)   
   Pfam (5)   
All databases (44)   

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