KEGG   Rattus norvegicus (rat): 360817
Entry
360817            CDS       T01003                                 
Symbol
Med13l
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
  KO
K15164  mediator of RNA polymerase II transcription subunit 13
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04919  Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    360817 (Med13l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    360817 (Med13l)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    CDK-module
     360817 (Med13l)
SSDB
Motif
Pfam: Med13_C MID_MedPIWI Med13_N
Other DBs
NCBI-GeneID: 360817
NCBI-ProteinID: NP_001406720
RGD: 1305884
Ensembl: ENSRNOG00000001120
Position
12:complement(43468556..43665819)
AA seq 2206 aa
MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRT
LLFKAIHNLLERCLMDKNFVRIGKWFVRPYDKDEKPVNKSEHLSCAFTFFLHGESNVCTS
VEIAQHQPIYVINEEHLHMAQSSPAPFQVLVSPYGLNGTLTGHAYKMSDPAARKLIEEWQ
CFYPMVLRKKEEPREEAELEYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVPQSGTS
AGGHVTIAQQGLGSVKDPSNCGMPLTPPTSPEQVVIGESGVQSAASHLGSHDGGMIATHS
PKRSKKIPPKLHSHMVHRVWKECILNRAQSKRSQMSAPAGEEEPAHSPAAWDFVDPTQRV
SCSCSRHKLLKRCAVGPSRPPTLSQPGFSAGPPPPSSLPPPASSKHKTTERQEKGDKLQK
RPLVPFHHRPSVAEELCMEQDAPGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRNTSKQMD
LNPMDSPHSPISPLPPTLSPQPRGQETESLDPPSVPVNPALYGNGLDLQQLSALEDRTVL
VGQRLPLMAEASETALYSGLRPSYTESSDRWWQSFRLPPSEDAEFRPPELQGEGFHTVLD
VSPESTALQRLLAQPNKRFKIWQDEQPQVQPLPFLDPSPLSQQPGDTLGEVNDPYTFEDG
DIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVPDGKNAMSIFSSATKT
DVRQDNAAGRAGSGSLTQVTDLAPSLHDLDNIFDNSDDDELGAVSPALRSSKMPTVGTEE
RPPGKDGRAAGPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGVSSETVTALGMLESP
VVSMVPTHLTEFRMEVEDGLGSPKPEDIKDFSYVHRVPQFQPFVGSSMFAPLKTLPSHCL
LPLKTPDACLFRPSWAVPPKMEQLPMPPAASSIRDGYNNVPSVGSLADADYLNTPQMNTP
VTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGS
PASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNVFKDRNFDSCCICACNMNVK
GADVGLYIPDSSKEDQYRCTCGFSAIVNRRLGYNSGLFLEDELDIFGKNSDIGQAAERRL
MMCQTSCQSTLLPQVEGARKAPEPPVSLLLLLQNQHTQPFASLSFLDYISSSSRHALPCV
SWTYDRVQADNNDYWTECVNALEQGRQYVDNPTGGKVDEALVRSATVHCWPHSNVLDTSM
LSSQDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESP
EPLPIPTLLVGYDKEFLTISPFSLPFWERLLLEPYGGHRDVAYIVVCPENEALLEGAKTF
FRDLSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLTEELVSEWFNQPWSSEESDNHS
RLKLYAQVCRHHLAPYLATLQLDSGLLMPPKHQSPPAEAQGQATPGNAGSSSSGSGAPPA
GSAFNPTSSSSAASSSSSCSGPPGSSATSAPGITQMSTTSSSGFSGGVGGQNPSAGGSST
DGTPGNVACGDAEHAQSCAQPSQDGQDSVTERERIGIPTEPDSADSHAYPPAVVIYMVDP
FTYTAEEDSSSGNFWLLSLMRCYTEMLDHIPEHMRSSFILQIVPCQYMLQTVKDEHVFYI
QYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSPPFILAP
IKDKQTEPGEAFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCVVNIALPSRS
RKSKVSARKIGLQKLWEWCLGIVQMTSLPWRVVIGRLGRLGHGELKDWSILLGECSLQTI
SKQLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRSTALNMQSSQ
LNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDDMFVDLPFPDDMDNDIGILMT
GNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEELKQQPLALGYFVSTA
KAENLPQWFWSSCPQARNQCPLFLKASLHHHISVAQTDELLPVRNSQRAPHPLDSKTTSD
VLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMNML
NT seq 6621 nt   +upstreamnt  +downstreamnt
atgaccgccgcggcgaactgggtggcgaacggggcgagcctggaggattgtcactctaac
ctcttctcgctggctgaactcacaggaatcaaatggcgtaggtacaattttggagggcac
ggggactgtggacccataatttcagccccagcccaagatgatccaatcctgttaagtttc
atccgctgtctgcaagccaacctgctctgtgtatggcgtcgtgacgtcaagccggattgc
aaagagctctggatattctggtggggagacgaacccaacctggtgggagtaatacatcat
gaactgcaggttgtggaagaaggactctgggaaaatggcctttcctatgaatgtaggacg
ctgctcttcaaagcaatccacaatctgttagaaaggtgcctaatggataagaacttcgtg
aggatcgggaagtggtttgtgcggccctatgacaaggatgaaaagccagtcaacaaaagt
gagcatctgtcctgtgctttcaccttctttcttcatggagagagtaacgtgtgcacaagc
gtggagatcgctcagcaccagccgatctatgtgatcaacgaggaacacttacacatggcc
cagtcttcaccagcaccatttcaagtgctggtgagtccttacggcttaaatggcacgcta
acagggcatgcatacaagatgtctgacccagcagcccgcaagctgattgaagaatggcag
tgtttctacccaatggtgctgaggaagaaggaggagcctcgagaggaggccgagctggaa
tatgacgatgactttcccgtggcagttgaagtcattgtcggtggtgtccggatggtctac
ccttcggctttcgtgttgatctctcagaatgatatcccggttcctcagagtggtaccagt
gctggagggcatgtcaccattgcacagcaggggctcggtagtgtgaaagaccccagtaac
tgtgggatgcctctgacgcctcccacctccccagagcaagtggttataggcgagagcggt
gtgcagagcgctgccagtcacctcgggtcccacgatggggggatgatagccacccacagt
ccaaagagatcaaagaagatccctcctaaactccacagtcacatggtccatcgagtctgg
aaggagtgcatccttaacagggcccagtctaagaggagccagatgtcagcgcctgctggg
gaggaagagcccgctcacagtcctgctgcctgggactttgttgacccaacccagagagtc
agctgctcctgctccaggcataaacttttaaagcggtgtgcagtaggacccagccgacct
cccacgctctctcagccaggcttcagtgcaggaccgccacccccttcatccttaccacct
cctgcttcttccaagcacaagaccacagaaagacaagaaaaaggagacaagttgcaaaag
agacccttggtgcccttccaccacaggccttctgtggctgaagagttatgcatggagcag
gatgcacctggacagaagctagggctggcagggatagactcttccttagaggtgtcaagc
agtcggaagtatgataagcaaatggccgtgccttccagaaacacaagcaagcaaatggat
ctgaatcctatggattcacctcactcccccatttcccctctgccccccaccctcagccct
cagccacgaggtcaggagacagagagtttggacccaccttctgtccctgtgaaccctgcc
ctctatggaaacgggctagaccttcagcagctctccgctctagaggacagaactgtcctt
gtaggccaaagactgcctctgatggcagaggccagtgagacagccttgtacagtgggctc
aggccttcatacactgagtcgtcagacaggtggtggcagagttttcgtctcccacccagt
gaggatgctgagttccggcctccagagctgcagggggaggggtttcacactgtactggat
gtgagccccgagagcactgccctgcaaagactcttagcacaacctaacaagcggttcaaa
atctggcaggatgagcagcctcaggtgcagccgctccccttcctggacccatcacctctg
tcacagcagcctggagacactctgggagaagtcaatgacccatacacctttgaggatggt
gacataaagtacatcttcacagcaaataagaaatgcaagcaggggacggagaaggactcc
ctgaaaaagaacaagtcagaggatggatttggtaccaaggatgtcactacaccaggtcat
tccacgccggtgcctgatgggaaaaatgccatgtctattttcagttctgctactaaaaca
gatgtccggcaggacaacgctgctggcagagctggctccgggagccttacccaagtgaca
gatctggccccttctctgcacgacttagacaacatctttgataactctgatgacgacgag
cttggggccgtgtcccctgctctccgctcatctaagatgccgactgttgggactgaggag
cggccccctgggaaggacggaagagctgctggcccttaccctccaacagttgcagacttg
caaaggatgttccccacccctccatcattggaacagcatcctgcattttccccggtgatg
aattacaaagatggagtgagttcagagacagtgactgcattgggcatgctggagagccct
gtggtcagtatggtccccacacacctcacggagttccggatggaagtggaagatggctta
ggaagtcccaagccagaggacataaaggacttttcctacgtgcacagagtgccgcagttc
cagcctttcgtgggctcttctatgtttgctccactgaagacgctgccaagccattgcctg
ctgcctctgaagacaccggatgcctgtctgttccggccctcatgggcggttcctccgaaa
atggagcagctgcccatgccccctgcagcctcttccattagagacggctacaacaatgtg
cctagtgttgggagcctcgcagatgcagactatctgaacacaccccagatgaacacccct
gtgacgctcaacagcgctgcccctgccagcaacagtggagccggggtccttccatctcca
gctacccctcgattctctgtgcccacacctcgaacccccaggactccaagaactcccaga
ggtgggggcactgctagtggccaagggtctgtgaaatacgatagcaccgatcaggggtca
ccggcttccaccccctctaccacaaggccccttaactctgtggagcctgccaccatgcag
ccaattcctgaggcccacagtctctatgtcaccctgattctgtcagattccgtgatgaat
gtcttcaaggacaggaactttgatagctgctgcatttgcgcctgcaacatgaacgtcaag
ggggcagatgtcgggttgtacatccccgactcctccaaggaggaccagtaccgttgcacc
tgtggcttcagtgcgatcgtgaaccggagacttggttacaactcggggctgttcctcgaa
gatgagctggatatttttgggaagaactctgacattggccaagctgcagagagacgcctg
atgatgtgccagacctcctgccaatccaccttgcttcctcaggtggagggcgcccggaaa
gccccagagccccccgtaagcctcctcctcctcctccagaatcagcacacacagcccttc
gcctctctcagctttctggattacatctcctccagcagccgccatgcacttccctgtgtg
agctggacttatgaccgggtgcaggcagataacaatgactactggacagagtgcgtcaat
gcattggagcaggggaggcagtacgtggataaccccacaggcgggaaagtggacgaggcg
ctggtgagaagtgccaccgtacactgttggccgcacagcaatgtgctggacacgagcatg
ctctcatcccaagatgtggtgcgcatgctgctgtccctgcagcccttcctacaagatgcc
atccagaagaagcgcacaggcaggacctgggagaacatccagcacgtgcaggggccactc
acctggcagcagttccataagatggccgggcgtgggacctacggttcagaagagtctcct
gagccactgcccatccccacgctgctggtgggctacgacaaggagttcttgaccatctca
cccttctccttgcccttctgggagaggctgctcttggagccctatgggggccaccgcgat
gttgcttacattgtggtgtgtccagaaaacgaggccttgctcgaaggagccaaaactttc
ttcagggacttgagtgctgtatatgagatgtgtcggctggggcaacacaagcccatctgc
aaagtactccgtgacgggatcatgcgtgtgggcaagaccgtggcacagaagctgacagag
gagcttgtgagcgagtggtttaaccagccgtggagcagtgaggagagtgacaatcattcc
agactcaaactttatgctcaagtttgccgccatcacctagcaccttatttagccactctg
cagcttgacagtggcctgctgatgccacctaagcaccagagcccaccagcagaagcacag
ggacaagccacgcctgggaatgctgggtcttcaagttcaggctcaggagcgcctccagct
ggcagtgcattcaaccccacatccagcagctctgcagcaagtagttcatcctcctgctct
gggccgccgggctcctcagccacctctgctccaggcatcactcagatgagcactacctct
tcttcaggattcagtggtggggttggagggcagaaccccagtgctgggggcagctccaca
gatggaaccccagggaacgtggcttgtggagatgctgagcatgcgcagagctgcgcccag
ccctcacaggacggacaagacagtgtcacagagagggagagaataggaatccccacggag
cccgactctgcagacagccatgcctaccctccagctgtcgtcatttacatggtggacccc
ttcacctacactgcagaggaggactccagctccggaaacttctggctgttgagcttgatg
cgctgctacacggagatgctggatcacatccccgagcacatgagaagctcgttcattctc
cagattgtgccttgccagtacatgctgcagacagtgaaggatgaacacgtcttctatatt
cagtacttgaagtccatggcgttttcagtgtactgccagtgcaggcggcctctgcctaca
cagatccacatcaaatccctcacgggctttgggcctgcagccagcattgagatgaccctc
aagaacccggagcggcccagtccaatccagctttattcccctccctttatattggcccca
atcaaagacaagcagacagagccgggagaggccttcggtgaggcgagccagaagtacaac
gtgctgttcgtgggctactgtctgtctcatgaccagcgctggctcttggcgtcctgcact
gacctgcatggggagttactggagacctgtgttgtaaacattgctttaccaagcaggtca
cggaagagcaaggtgtctgcacgtaagatcgggctgcagaagctgtgggaatggtgcctg
gggattgtccagatgacatctctgccctggagagttgtcattggccgcttggggcggctt
ggccatggggaactgaaagattggagtatcctccttggagaatgttcactgcagacaatc
agcaaacagctcaaggatgtgtgccgcatgtgtgggatctctgctgcagactctccttct
atcctcagtgcctgcctggttgccatggagccccaggggtcctttgtagtgatgccagat
gctgttacaatgggctctgtgtttggccgaagcactgcgttgaacatgcagtcgtcccag
ctgaacacacctcaggatgcctcctgcacccacatcctggtgttcccgacatcgtcaacc
atccaggtggctccagccaactaccccaatgaggatgggtttagccccaacaatgatgac
atgttcgtagaccttccatttccagacgacatggacaatgacattggcatcctcatgacc
gggaacctccactcctctcccaactcctctccggttccctctccgggctctccctctgga
atcggggtgggctctcacttccagcacagtcggagccagggagagcggcttctgtcccgg
gaggctccagaggagctcaagcagcagcccctggcccttgggtattttgtatcaactgcc
aaagctgagaacctcccgcagtggttttggtcatcatgcccgcaggcccggaaccagtgc
ccactcttcctgaaggcctcactccatcaccacatctctgtagcacagaccgacgagctc
cttcctgtcaggaactctcagcgggctccacaccctctggactccaagaccacatctgat
gttctaaggtttgtgctggagcagtacaatgccctgtcctggctcacgtgcaatccggcc
acccaggaccgtacttcctgccttcccgtccactttgtggtgctcacgcagttgtacaat
gccatcatgaacatgctctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (12)   
   RefSeq(nuc) (6)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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