KEGG   Rattus norvegicus (rat): 361004
Entry
361004            CDS       T01003                                 
Symbol
Zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
  KO
K25207  zinc finger SWIM domain-containing protein 8
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    361004 (Zswim8)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Target recognizing subunit
     361004 (Zswim8)
SSDB
Motif
Pfam: ZSWIM4-8_C Ku_PK_bind
Other DBs
NCBI-GeneID: 361004
NCBI-ProteinID: NP_001258204
RGD: 1309414
Ensembl: ENSRNOG00000056617
UniProt: A0A0G2K9R0
Position
15:complement(3623040..3638748)
AA seq 1797 aa
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCAQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFNWEEAYPLPGVTYSGTDRKLALCWARALPTRPGASRSGALEESRPRPLPTEPAVRP
KEPGAKRKGLGEGVSSQRGPRRLSAEGDKALHKMCPSGAKAKVLGGPGSGGKSSAGSGSK
RRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPPSAGSRGPSTFLPEPP
DTYEEDADDSGSGLHKTKEAAPAVGEEDDDYQAYYLSAQDGAGGEEEKAEGGTGEEHDLF
AGLKPLEQESRMEVLFACAEALHAHGYSNEASRLTVELAQDLLANPPDLKVEPPPAKGKK
NKVSTSRQTWVATNTLTKAAFLLTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKL
AYQESEVAALLKKIPRGPSEMSTIRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVV
SLTGSRPPSRNWSNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALAL
MITYKDDQAKLKKILDKLLDRESQTHKPQTLSSFYSSSRPATANQRSPSKHGAPSAPGAL
QPLTSSSAGPAQPGNVAGAGPAPTEGFTEKNVPESSPHSPCEGLPPEAALTPRPEGKVPS
RLALGSRGGYNGRGWGSPGRPKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPASW
GRGQDSDSISSSSSDSLGSSSSSGSRRASASGGARAKTVEVGRCYKGRRPESHAPHVPNQ
PSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLH
NFVSPNWLSRTYSSHVSWITGQAMEIGSAALTILVECWDGHLTPPEVASLADRASRARDS
NMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEV
LFEVAHQWFWLYEETAGGSSTAREGAASCSGSGMRAAGEGGRGLPEGRGAPGTEPVTVAA
AAVTAAATVVPVISVGSSLYPGPGLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPM
PHMPRPAVFPVPSSAYPQGVHPAFLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHT
EPGLPLPTSVALSSVHPASTFPAIQGASLPALSTQPSPLVSGGFPPPEEETHSQPVSPHS
LHHLHAAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYVHQFCV
GAAKGVLSPFVLQEIVMETLQRLNPIHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLT
PADYDDFVNAIRSARSAFCLTPMGVMQFNDILQNLKRSKQTKELWQRVSLEIATFSP
NT seq 5394 nt   +upstreamnt  +downstreamnt
atggagctgatgttcgcggagtgggaggacggcgagcgcttctcgtttgaggattccgac
cgctttgaggaggattcactctgttcgttcatttctgaggccgagagcctttgccagaac
tggcgaggatggcgcaaacagtcagcggggcccaattcccccactggaggcggtggcgga
ggtggcagtggcggtaccagaatgcgagatggattggtgatccctctggtggagctgtca
gccaagcaggtggcattccacatcccatttgaggtggtggagaaggtttaccctccagtg
cctgagcaactccaactccgaatcgctttctggagcttccctgagaacgaagaggacatc
cgtctgtattcatgcctagccaatggcagtgcggatgagttccagcgaggggatcagctg
ttccgaatgagggctgtgaaagatcccctgcagatagggttccatctgagcgctacagtg
gtaccaccgcagatggtccctcccaaaggggcctacaatgtggctgtgatgtttgaccgc
tgccgggtcacttcctgtagctgtacctgtggggctggggccaaatggtgcacccatgtc
gtggcactctgtctcttccgcattcacaacgcatctgcagtttgcctgcgggctcccgtc
tcagagtccctgtctcggctacaaagggaccagcttcaaaaatttgctcagtacctgatc
agtgagctccctcagcagattctccccacggcccagcgtcttctagatgaactcctttcc
tcccagtcaacagccatcaatacagtatgtggagctccggaccctacagcagggccctca
gcttcagaccagagcacttggtacttggatgagtcaacgctcactgacaacataaagaag
acgctgcacaagttctgcggcccctcccctgtggtcttcagtgatgtgaactctatgtac
ctctcctccacggagcctcctgctgcagctgagtgggcatgtctgctgcgccctctgagg
ggtcgagagcctgagggcgtctggaacctgcttagcattgttcgagagatgttcaagcgg
agggacagcaatgctgcccccttgctagaaatactcacggaccagtgcctcacctacgaa
cagatcacgggctggtggtacagcgtgcgtacctcagcttcacacagcagtgccagtggt
cacacaggccgtagcaacggacagtcagaggtagcagcccatgcatgtgcaagtatgtgt
gatgagatggttaccctctggaggctggctgtgctggaccctgccctcagccctcagcgc
cgccgggaactgtgtgcgcagctgcgccagtggcaactgaaggtgattgagaatgtcaag
cggggacagcacaagaagaccctcgagaggcttttccctggcttccggccagctgtggag
gcctgctactttaactgggaagaggcttatccccttcctggcgttacctacagtggcacc
gaccgaaagctagccctgtgctgggcccgggccctgcccactaggccaggagcctctaga
tctggggccctggaagagtcccggccacgtcctcttcctactgagccagctgtgaggccc
aaggaacctggggccaagcgcaaaggattgggtgagggggtctcttcacagcggggtccc
cgccgcctctcggctgaaggagataaggctctgcataaaatgtgcccaagtggggccaaa
gccaaggtactgggtgggcctggcagtgggggcaagagctcagcaggcagtgggagcaaa
cgacggctaagcagtgaagacagctccctggaaccagacttggcagagatgagcctggat
gacagcagcctggccctgggtgcagaggccagcacctttgggggattccctgagagccct
ccaccctgtcctccctcagctggctccagagggccttccacctttcttccggagccccca
gacacttatgaggaagatgctgacgacagtggcagtgggctacacaaaaccaaagaggca
gctcctgcagttggagaggaggatgatgactaccaagcgtattacctgagtgcccaggat
ggggctggaggcgaggaggagaaggctgagggcgggactggggaagagcatgacctgttt
gctggtttgaagccactggaacaggagagcaggatggaggtgttatttgcctgcgctgag
gccctgcatgcccatggctacagcaatgaggcctcccgcctcactgtggagcttgcccag
gacctgctagccaacccacctgacctcaaggtagagccgccccctgccaagggcaagaag
aacaaggtatccacaagccgtcagacctgggtggctaccaacactctgaccaaagcagcc
ttcctgttgacagtgctaagtgagcgccctgagcaccacaacctggccttccgagtcggc
atgtttgcactggagctacagcggcctcctgcttcaaccaaggccttggaggtaaagttg
gcatatcaggaatctgaggtggccgctctgctcaagaagatccctcggggtcccagtgag
atgagcaccattcggtgccgggcagaagaacttcgagagggcacactgtgtgactaccgc
cctgtcttgcccctcatgttggccagcttcatcttcgatgttctctgtgctccagtggtt
tctctcacgggttcccggcccccaagtcgaaactggagtaacgagatgcctggagatgag
gagctagggtttgaagcagcagttgctgccttgggcatgaagacaacagtgagtgaggca
gaacaccccctcctatgtgaaggcacacggcgggagaagggtgacctggccttagcactc
atgatcacttacaaggacgaccaggccaagctcaagaagatcctagacaaactcttggac
cgagaaagccagacccataagccacagaccctgagttctttctactcatctagccgtcca
gccacagccaaccagagatctccttcaaagcatggggccccatctgcccccggggccctg
cagccactgacttcaagctctgcagggcctgctcagccggggaatgtggcaggggctggg
ccagctcccactgagggcttcacagagaagaacgtgcccgaaagctccccacattccccc
tgtgaaggtctcccacctgaggcagctttgaccccacggccggaggggaaggttcctagc
cgactagcacttggcagtcgtggaggctataatggccgaggttggggctccccagggagg
cccaagaagaaacatacaggcatggccagtattgacagcagcgccccagaaaccacatcg
gacagctctcctaccttaagccgaaggccacttcgagggggctgggcccctgcttcctgg
ggccgaggacaagacagtgatagcattagcagctcttcctcagactctctgggctcctca
tcctccagtggaagccgccgggctagtgccagtggcggggcccgggcaaagaccgttgaa
gttggcaggtgttacaaaggccgccgccctgagagtcatgccccccacgtacccaatcag
ccgtcagaggcagctgcacacttctattttgaattggcgaagacagttctgatcaaggca
gggggcaacagcagcacctccattttcacacatccatcttcctcaggaggccaccagggt
cctcatcgcaacctgcacctctgcgcctttgagattgggctttatgccctaggcctgcat
aactttgtttctcctaactggctctctcgtacctactcttcccatgtgtcctggattaca
gggcaggcgatggagattggcagtgcagccttgactatactggtggaatgctgggatggg
cacctgacaccccctgaggtcgcatcgctggctgatagagcatcacgggcacgagactcc
aacatggtgagggcagcggcagagctggccctcagctgcctgcctcatgcccatgcactg
aaccccaatgaaatccagcgagccctggtgcagtgcaaggaacaggataatctgatgctg
gagaaggcctgcatggcagtggaagaggccgccaagggtgggggcgtgtaccccgaagtg
ctgtttgaggtggctcaccagtggttctggctttatgaggagacagcaggcggctcatcc
acagcccgtgaaggggctgcaagctgtagtggcagtggcatgagggctgctggggagggt
gggcgaggactccctgagggtaggggcgccccagggaccgaacctgttacagtggctgcc
gcagcagtgacagcagccgccacagtggttccagtcatctcagtggggtccagtttatat
ccaggtccaggactggggcatggtcattcccctggcctgcacccctacactgctctccag
ccccacctcccctgcagccctcagtacctcacccacccagctcaccctgcccaccccatg
cctcatatgccccggcctgccgtcttccctgtgcccagctctgcatacccacagggtgtg
catcctgcattcctgggggctcaatacccttactcagtgacgcctccctcacttgctgcc
actgctgtatctttccctgtcccttccatggctcccatcacagtccatccttaccacaca
gagccagggctcccactgcccaccagtgtggccttgagcagtgtccacccagcatccaca
tttccagccatccagggtgcctcactgcctgctctgagcacacagcccagccctctggta
agcggaggtttcccaccacccgaagaggagacgcacagtcagcccgtcagtccacacagc
ctgcaccacctgcatgctgcctaccgtgttgggatgctggcactggagatgctaggtcgc
cgggcacataacgatcaccccaacaatttctcccgctcccccccttacactgatgatgtc
aaatggttgctggggctggcagcaaagctgggagtgaactacgtgcaccagttctgtgtg
ggggcagccaagggggtgctgagcccgtttgtgctgcaggagatcgtcatggagacgctg
cagcggctgaaccccattcatgcccacaaccaccttcgagccccggccttccaccagctg
gtgcagcgctgtcagcaggcgtacatgcagtacatccaccaccgcttaattcacctgacc
cctgccgactacgacgacttcgtgaatgcgatccgcagcgcccgcagcgccttctgcctg
acgcccatgggcgtgatgcagttcaacgacatcctgcagaacctcaagcgcagcaagcag
accaaggagctgtggcagcgggtctccctggagatagccaccttctccccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

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