KEGG   Rattus norvegicus (rat): 500532
Entry
500532            CDS       T01003                                 
Symbol
Rnf220
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X3
  KO
K25174  E3 ubiquitin-protein ligase RNF220 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    500532 (Rnf220)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     500532 (Rnf220)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    500532 (Rnf220)
SSDB
Motif
Pfam: RNF220 zf-C3HC4_2 zf-C3HC4_3 zf-RING_5 zf-C3HC4 zf-RING_2 Pox_A_type_inc Rad50_zn_hook zf-ANAPC11 zf-RING_UBOX zf-Nse
Other DBs
NCBI-GeneID: 500532
NCBI-ProteinID: XP_008762298
RGD: 1598210
Ensembl: ENSRNOG00000019236
UniProt: D4AA66
Position
5:complement(135975739..136198017)
AA seq 308 aa
MPRARSGRRSREAGGREETFLRVRANRQTRLNARIGKMKRRKQDEGQVCPLCSRPLAGSE
QEMSRHVEHCLSKREGSCVAEDDAVDIEHENSNRFEEYEWCGQKRIRATTLLEGGFRGSG
FVMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADVIPCTGEEPGEAKEREALRGAVLNG
GPPSTRITPEFSKWASDEMPSTSNGESSKQEAMQKTCKNSDIEKITEDSAVTTFEALKAR
VRELERQLSRGDRYKCLICMDSYSMPLTSIQCWHVHCEECWLRTLGAKKLCPQCNTITAP
GDLRRIYL
NT seq 927 nt   +upstreamnt  +downstreamnt
atgccgagggcccggagcggccggcggagcagggaggccggcgggagggaggaaaccttc
ttgcgagtgcgagccaaccggcaaacccgactgaatgctcggattgggaaaatgaaacgg
aggaagcaagatgaagggcaggtatgtcccctgtgcagccgccccctggcaggatcggag
caggagatgagtaggcatgtggagcattgcctttctaagagggaaggctcctgcgtggct
gaggatgacgccgtggacatcgagcatgagaacagcaaccgctttgaggagtatgagtgg
tgtgggcagaagcggatacgggccaccacgctcctggaaggtggcttccgaggctccggc
ttcgttatgtgcagtggtaaagagaatccagacagtgatgctgacctggatgtggatgga
gatgacactctggagtatgggaaaccacaatacacagaggctgatgtcatcccatgcaca
ggagaagagcctggtgaagccaaggagagagaggcactccggggcgcagtcctaaatggt
ggccccccgagcacccgcatcacacctgagttctctaaatgggccagtgatgagatgccg
tccaccagcaatggtgaaagcagcaagcaggaagccatgcagaagacctgcaagaacagt
gacattgagaaaatcaccgaagattcagctgtaactacctttgaggctctaaaggctcgg
gtcagggagcttgaacggcagctatctcggggtgaccgatacaaatgcctcatctgcatg
gactcatactcaatgccgctgacgtcgatccagtgttggcatgtgcactgtgaagagtgt
tggcttcggactctgggtgccaagaagctctgccctcagtgcaacaccatcacagcccct
ggagacctgcggaggatctacttatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (14)   
   RefSeq(nuc) (12)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (51)   

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