KEGG   Rhodopseudomonas palustris BisB18: RPC_4726
Entry
RPC_4726          CDS       T00336                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rpc  Rhodopseudomonas palustris BisB18
Pathway
rpc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RPC_4726
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpc03019]
    RPC_4726
   03110 Chaperones and folding catalysts [BR:rpc03110]
    RPC_4726
   03029 Mitochondrial biogenesis [BR:rpc03029]
    RPC_4726
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rpc04147]
    RPC_4726
Enzymes [BR:rpc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     RPC_4726
Messenger RNA biogenesis [BR:rpc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     RPC_4726
Chaperones and folding catalysts [BR:rpc03110]
 Heat shock proteins
  HSP60 / Chaperonin
   RPC_4726
Mitochondrial biogenesis [BR:rpc03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    RPC_4726
Exosome [BR:rpc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   RPC_4726
  Exosomal proteins of other body fluids (saliva and urine)
   RPC_4726
  Exosomal proteins of breast cancer cells
   RPC_4726
  Exosomal proteins of colorectal cancer cells
   RPC_4726
  Exosomal proteins of bladder cancer cells
   RPC_4726
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ABD90248
UniProt: Q20X88
Position
5286835..5288490
AA seq 551 aa
MAAKDVKFAGDARDRMLRGVDILANAVKVTLGPKGRNVLIERSFGAARITKDGVTVAKEI
ELEDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGI
EIAVAAVIKDLVKRAKPVASSAEIAQVGTISSNGDAAIGKMIAQAMQKVGNEGVITVEEN
KSLTTEVDIVEGMKFDRGYLSPYFVTNAEKMAVEFDDAYVLLHEKKVSGLQSMLPLLEAV
VQSGKPLVIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDLAILTGGQL
ISDDLGMKLENVTLKMLGRAKKLVIDKENTTIVGGAGKKADIETRVGQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALL
RAKKAVGRISNDNPDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFD
AQTEEYVDMLAKGIVDPAKVVRTALQDASSVAALLVTTECMVAEMPRDAAPAMPGGGGGM
GGMGGMGGMGF
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggcagccaaggacgttaaatttgccggcgacgcgcgcgatcgcatgttgcgcggcgtc
gacattctcgccaacgcggtcaaggtgacgctcggtccgaagggccgcaacgtcttgatc
gagcgctcgttcggcgccgcccgcatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctcgaggacaagttcgagaacatgggcgcgcagatgctgcgcgaggtcgcctccaag
accaacgacctcgccggtgacggcaccaccaccgccaccgtgctggcgcaggcgatcgtg
cgcgaaggcgccaagtcggtcgccgccggcatgaacccgatggacctcaagcgcggcatc
gagatcgccgtcgccgcggtgatcaaggacctcgtcaagcgcgccaagccggtggcctcc
tccgccgagatcgcccaggtcggcaccatctcgtcgaacggcgacgccgcgatcggcaag
atgatcgcccaggcgatgcagaaggtcggcaacgaaggcgtcatcaccgtcgaagagaac
aagtcgctgaccaccgaagtcgacatcgtcgaaggcatgaagttcgatcgcggctacctc
agcccgtacttcgtcaccaacgccgaaaagatggccgtcgagttcgacgacgcctatgtg
ctgctgcatgagaagaaggtgtcgggcctgcagtcgatgctgccgctgctcgaagccgtg
gtgcagtccggcaagccgctggtgatcatcgccgaggacgtcgaaggcgaggcgctggcc
accctggtggtcaaccggctgcgtggcggcctcaaggtcgccgccgtcaaggcgccgggc
ttcggcgatcgccgcaaggcgatgctggaagacctcgcgatcctgaccggcggtcagctg
atctccgacgacctcggcatgaagctcgagaacgtcacgctgaagatgctgggtcgcgcc
aagaagctggtgatcgacaaggagaacaccaccatcgtcggcggcgccggcaagaaggcc
gatatcgaaacccgggtcggccagatcaaggcgcagatcgaggaaaccacctcggactac
gaccgcgagaagctgcaggaacggctcgccaagctggccggcggcgtcgcggtgatccgc
gtcggcggcgccaccgaggtcgaggtgaaggaaaagaaggaccgcgtcgaagacgcgctc
aacgccacccgcgccgcggtgcaggaaggcatcgtccccggcggcggcgtcgccctgctg
cgcgccaagaaggcagtcggccgtatcagcaacgacaatcccgacgtccaggccggcatc
aacatcgtgctgaaggcgctggaagctccgatccgccagatcgccgagaacgccggcgtc
gaaggctcgatcgtggtcggcaagatcctcgagaacaagtcggagaccttcggcttcgac
gcccagaccgaggaatatgtcgacatgctcgccaagggcatcgtcgacccggccaaggtg
gtgcgtaccgcgctgcaggacgcctcctcggtcgcggccttgctggtgaccaccgaatgc
atggtcgcggaaatgccgcgcgacgcggccccggcgatgccgggcggcggcggcggcatg
ggcggaatgggtggcatgggcggcatgggcttctaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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