KEGG   Rickettsia prowazekii NMRC Madrid E: H374_4180
Entry
H374_4180         CDS       T02544                                 
Name
(GenBank) 30S ribosomal protein S11
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
rpn  Rickettsia prowazekii NMRC Madrid E
Pathway
rpn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rpn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    H374_4180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rpn03021]
    H374_4180
   03400 DNA repair and recombination proteins [BR:rpn03400]
    H374_4180
Enzymes [BR:rpn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     H374_4180
Transcription machinery [BR:rpn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     H374_4180
DNA repair and recombination proteins [BR:rpn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      H374_4180
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L IDH
Other DBs
NCBI-GeneID: 15150194
NCBI-ProteinID: AGJ01705
Position
487339..488361
AA seq 340 aa
MLSLSKNWNTLIKPNRVTYENFPETNNKAKIIVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVQEDVSEVILNIKGIEVKMHVSEKRIIKLKAMGPCVVTAGMI
DTGHDVEILNPDHVICNLAKNKQLEMELTCKVGKGYVLSTNSYEDNLPIGEIAIDALFNP
VKSVTYKVENTRVGQVTDYDKLIMFVETNGDVLPEMAVGLAARILQEQLQLFIAFEEQEE
DKQVKTDSLPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTESDMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENIQELSKRYEDSYN
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgttatcattaagtaaaaattggaatactttaataaagccgaatagagtcacatatgaa
aatttcccggaaaccaataataaagctaaaattatagttgaacctttagaaagaggtttt
ggtttaacacttggtaatgctatgagaagagtgttattatcttctttacaaggtgcggcc
attacttctataaagattcctgctatagagcatgagttttcttctatacctggtgtacaa
gaagatgtatcagaagtgattttaaacattaagggtattgaagtcaaaatgcatgtttcg
gaaaaacgtatcataaaattaaaagcaatggggccttgtgttgtaacagcaggtatgatt
gatacagggcatgatgtagaaatattgaatccggatcatgtaatttgtaatttagctaag
aataagcagcttgaaatggagttaacatgtaaggttggtaaaggatatgtacttagcaca
aatagctatgaggataacttacctattggcgaaatagctatagatgctttatttaaccca
gtaaaaagtgttacttataaagtcgaaaatactagggtgggtcaagttactgattatgat
aaattgattatgtttgtagaaactaacggtgatgtattacctgaaatggctgtaggatta
gctgcacgtattttacaagagcaattacaattatttattgcttttgaagagcaagaagag
gataagcaagtaaaaactgattctttaccattttcgccatatttacttaagagagttgat
gaattggaattatcagttagatctgcaaattgtttaaaaaatgataatataatatatata
ggagatctagtaaaaagaacggaatccgatatgttaagaactccaaattttggtagaaaa
tctttaaatgagattaaggaaatattggcaaagtttaatttaagatttggtatggatgta
ccagattggccaccagaaaatattcaagaattatctaaacgttatgaagattcttataat
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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