KEGG   Rickettsia prowazekii Katsinyian: M9Y_02780
Entry
M9Y_02780         CDS       T01792                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
rps  Rickettsia prowazekii Katsinyian
Pathway
rps03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    M9Y_02780 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rps03021]
    M9Y_02780 (rpoZ)
   03400 DNA repair and recombination proteins [BR:rps03400]
    M9Y_02780 (rpoZ)
Enzymes [BR:rps01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     M9Y_02780 (rpoZ)
Transcription machinery [BR:rps03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     M9Y_02780 (rpoZ)
DNA repair and recombination proteins [BR:rps03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      M9Y_02780 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AFE50224
Position
complement(727690..728073)
AA seq 127 aa
MARITAEDCNKIIPDRFRLVVLATRYAKLLNYKVETNQIKKEKRDKPPVISLRRIAAGKV
SVPQLEQDLINSLRTRMMIEPLINQDESEDVEEKFEYLPEVYIGEDYSDLDDQIFINENG
EDYETDK
NT seq 384 nt   +upstreamnt  +downstreamnt
atggcaagaattacagcagaagattgtaataaaattatacctgatagatttcgacttgtt
gtactagctacaagatatgcgaaattattaaattataaagtggaaactaatcaaattaaa
aaagaaaagcgtgataagcctcctgttatctcattacgtagaattgctgcaggtaaagta
tcggtgcctcagttagaacaagatttaataaatagtttgcgtaccagaatgatgatagag
ccacttattaatcaagatgaatcagaagatgtagaagaaaaatttgaatatttacctgaa
gtttatatcggagaagattattctgatttagatgatcaaatctttattaatgagaatggc
gaagattatgaaaccgataagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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