KEGG   Rhodopseudomonas palustris TIE-1: Rpal_1356
Entry
Rpal_1356         CDS       T00722                                 
Name
(GenBank) RNA-binding S4 domain protein
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
rpt  Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:rpt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rpt03009]
    Rpal_1356
Enzymes [BR:rpt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     Rpal_1356
Ribosome biogenesis [BR:rpt03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Rpal_1356
SSDB
Motif
Pfam: S4 PseudoU_synth_2 S4_2
Other DBs
NCBI-ProteinID: ACE99895
UniProt: B3QIH2
Position
1428142..1430352
AA seq 736 aa
MPRDTRKDNDSARGRRDRPAGGKGGFGGRGPAGGKGPAGSKGAFGGKGRSGAARGPEKKF
AKRAGEGAGEGRGDKTYAKKSFGGDAKRSFGGEGKRPYAKRDGAAPRRDFADRPRRDDGD
APRPRFNRDDRPARSGGDRPERGPRKEFGDRAERGPRKEFGDRPKRDFGDRPKRDFSDRP
KRDFADRPKRPFKRDGEPGRDRGDDKPWRAREDRPARAGGDRDRKFDKGGFDKPRFSKSR
DDKPRFDRDRGDKPRFDKPRGDKPRFDRGERSERPERSGDRPKFSRPRDGDRGEQRPFRE
RSFDRPREDRPRSDRPRSDRPREDRPQRDRAARHGDWHEHPKNEGRGFDRPRTSRDDERS
FDRPRRDNEDGGRIFAKRPAFGGRGAFRKQDPAASKRKPAAPAKSDKAGERIAKVVARAG
LCSRRDAEAWITEGRVTVNGKVIDSPALDVKASDVITIDGKPLPERERTRLFLYHKPRGL
MTTHSDPEGRPTVFDHLPEGLPRLISIGRLDFNTEGLLLLTNDGGLARALELPETGWLRR
YRVRAHGEITQAQLDELQNGIEVDGVQYGPIEAKLERDQGANVWLVFAIREGKNREVRNV
LAHLGLEVNRLIRVSYGPFQLLELGEGEVDEVKTRVLRDQLGEKVIALAGCDFAGPSPSE
TKPKPRAGKAVSAEEWAVADAAPAPKKTITKRGAVEDRKGRKVKVERTASEGGDRPLSRG
PARRYHGKRDLAPRDE
NT seq 2211 nt   +upstreamnt  +downstreamnt
atgccccgcgacacccgtaaagacaacgactctgcgcggggccgccgcgacaggcccgcc
ggcggtaagggcggtttcggcggcagaggcccggccggcggcaaaggcccggcgggcagc
aagggagcgttcggcggcaagggccgctcgggtgcggccagggggccggagaagaaattc
gccaagcgcgccggcgaaggtgccggcgagggacgtggcgacaagacctacgccaagaag
tcgttcggcggtgacgccaagcgctcgttcggcggcgagggcaagcggccctatgccaag
cgcgacggcgccgcgccgcgccgcgatttcgccgaccgtccgcgccgcgatgacggcgat
gcgccgcgtccgcgtttcaaccgcgacgaccgtcccgcgcgcagcggcggcgaccgtccc
gagcgcggccctcgcaaggaattcggcgatcgtgcggagcgcggtccgcgcaaggagttc
ggtgaccgtcccaagcgcgatttcggcgaccggccgaagcgcgacttcagtgatcgcccc
aagcgcgattttgcggatcggccgaagcgccccttcaagcgcgacggcgagccgggtcgc
gaccgcggcgacgacaagccgtggcgcgcccgcgaggaccggccggcgcgtgccggtggc
gatcgcgaccgcaagttcgacaagggcggcttcgacaagccgcggttctccaaatcgcgc
gatgacaagccgcgcttcgaccgtgatcgaggcgacaaaccccggttcgacaagccccgc
ggcgacaagccgcggttcgatcgcggcgagcgttccgagcgccccgaacgcagcggcgac
cggccgaaattttcccggccgcgcgacggcgatcgcggcgaacagcgtccgttccgtgag
cgcagcttcgatcgtccgcgcgaggatcggccgcgcagtgaccgtccgcgcagtgaccgc
ccgcgtgaggaccgtccgcaacgcgaccgtgccgccaggcatggcgactggcacgagcat
ccgaagaacgaggggcgtggcttcgatcgtccgcgcacgagccgcgacgacgagcgcagc
ttcgaccgcccgcgccgcgacaacgaggacggcggccggatcttcgccaagcgcccggcg
ttcggcggccgcggcgcgttccgcaagcaggatccggcagcttccaagcgtaagccggcg
gcgccggcgaaatccgacaaggccggcgagcgcatcgccaaggtagtggcgcgcgcgggg
ctgtgctcgcgccgcgacgccgaggcgtggatcacggaagggcgtgtcactgtcaacggc
aaggtgatcgacagcccggcgctcgacgtcaaagcgagcgacgtcatcaccatcgacggc
aagccgttgccggagcgcgaacgcacgcggctgttcctgtatcacaagccgcgcggcctg
atgacgacgcacagcgatccggaaggtcgcccgacggtgttcgaccatctgcccgaaggg
ctaccgcggctgatctcgatcggccggctcgacttcaacactgaaggcctgctgctgctc
accaatgacggcggcctcgcacgcgcgctggagctgccggagaccggctggctgcggcgc
taccgcgtccgcgcgcatggcgagatcacccaggcgcagctcgacgagctgcagaacggc
atcgaggtcgacggcgtgcagtacggcccgatcgaggccaagctggagcgtgaccagggc
gccaatgtctggctggtgttcgcgattcgcgagggcaagaaccgcgaagtccgcaacgtg
ctggcgcatctcggtctcgaggtgaaccggctgatccgcgtctcctacggcccgttccaa
ctgctcgaactcggtgaaggcgaggtcgacgaggtcaagacccgtgtgctgcgcgaccag
ctcggcgagaaggtgattgcgctcgccggttgcgacttcgccggcccatcgccgagtgag
accaagccgaagccgcgcgccggcaaggccgtgtccgccgaggagtgggcggtggccgat
gctgcacccgcgccgaagaagacgatcaccaagcgcggcgcggtcgaagatcgcaagggc
cgcaaggtcaaggtcgaacgcaccgccagcgaaggcggcgatcgcccgctgtcgcgcggc
cccgcccgccgctaccacggcaaacgcgacctcgcgccgcgggacgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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