KEGG   Rhodospirillum rubrum F11: F11_13685
Entry
F11_13685         CDS       T02006                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
rrf  Rhodospirillum rubrum F11
Pathway
rrf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rrf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    F11_13685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rrf03021]
    F11_13685
   03400 DNA repair and recombination proteins [BR:rrf03400]
    F11_13685
Enzymes [BR:rrf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     F11_13685
Transcription machinery [BR:rrf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     F11_13685
DNA repair and recombination proteins [BR:rrf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      F11_13685
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L IDH
Other DBs
NCBI-ProteinID: AEO49199
Position
complement(3094597..3095613)
AA seq 338 aa
MIQKNWQELIKPNKLMIELVGGSKKVATVVAEPLERGFGLTLGNALRRVLLSSLQGAAVT
AIQIEGVLHEFSSIPGVREDVTDVILNIKGLALLMHSEGPRRMTLKASGPGEVTAAQIEM
GSDIEIMNPDLVICHLDEGATLSMEFTVGMGKGYVPSTQNRPEDAPIGYIPIDSIFSPVT
KVSYRVENSRVGQVTDYDKLSMVVETDGSVGPEDAVALAARILQDQLQLFINFEEPQAVS
EEKKDDELPFNKNLLRKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEMLRTPNFGRKS
LNEIKEVLAQMGLHLGMEISNWPPENIEDLAKKLEEPY
NT seq 1017 nt   +upstreamnt  +downstreamnt
gtgatccaaaagaattggcaggaactgattaagccgaacaagctcatgatcgagttggtc
ggcggatccaaaaaagtcgccacggtcgtggccgagccgctggagcgtggattcggtttg
acccttggcaacgccctgcgtcgcgtgttgctgtcgtcccttcagggcgcggcggtgacc
gccatccagatcgagggcgttctgcacgagttctcgtcgatccccggcgtccgcgaggat
gtcaccgacgtgatcctcaacatcaagggcttggcgctcctgatgcattccgagggtccg
cgccggatgacgctgaaggcgagcggccccggtgaggtgaccgccgctcagatcgagatg
gggtccgatatcgagatcatgaatcccgatctggtgatctgccacctcgacgaaggcgcg
accttgtcgatggagttcaccgtcggcatgggcaagggctatgttccctcgacccagaac
cgtcccgaggacgccccgatcggctatattccgatcgacagcatcttctcgccggtgacc
aaggtctcctatcgcgtcgagaacagccgtgtcggtcaggtcaccgactatgacaagctg
tcgatggtggtcgagaccgatggttcggtcggtcccgaggacgcggtggctttggccgcg
cgcattctccaggaccagcttcagctgttcatcaacttcgaggagccccaggcggtttct
gaggagaagaaggacgacgagctgccgttcaacaagaacctgctgcgcaaggtcgacgaa
ctggagctttcggtccgttcggcgaactgcctgaagaacgacaacatcatctatatcggc
gatctggttcagaagaccgaggccgagatgctgcggacgccgaatttcggccgcaagtcg
ctcaacgagatcaaggaagtgctggcccagatggggctgcacctgggcatggaaatttcc
aactggccgcccgagaatatcgaggatctggccaagaagctggaagagccctactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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