KEGG T00643: RrIowa

Rickettsia rickettsii Iowa: RrIowa_0183

Entry

RrIowa_0183       CDS       T00643

Symbol

virB6.5

Name

(GenBank) channel protein

K03201

type IV secretion system protein VirB6

Organism

rrj Rickettsia rickettsii Iowa

Pathway

rrj03070

Bacterial secretion system

Brite

KEGG Orthology (KO) [BR:rrj00001]
09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RrIowa_0183 (virB6.5)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rrj02044]
    RrIowa_0183 (virB6.5)
Secretion system [BR:rrj02044]
Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   RrIowa_0183 (virB6.5)

SSDB

Motif

Pfam:

TrbL DUF2501 HTH_3 aRib SCP2_2

Other DBs

NCBI-ProteinID:

ABY72101

UniProt:

B0BW75

Position

147988..151449

AA seq 1153 aa
MNKNIFITLLISLLLLSGCTGDTCIDPDDFGFIKFNVSARYDPEEITSRQEGNQVAPWRD
SAYKVNGYPLTIMVRPWSYILGDKNTSGQLSAWCPWYGQKNNTTTLAAFCVKLQPCTFWD
NSRLDMCTPNPANKNDAMISNAPCIMTNGVGLYFLIAAKNTDPNISPDSQSKPQGITQHL
GEELTSGYEFYSTSSIGQFLEAGGINYQYKGEDKSKYAQSPLYFKIIDKFYNDNSGQYRL
VIKSGVTDTRPDPLQFLTDLIKGVLFGKDGIIKKTYQQIIDTSGYRMSVSAILTLYIMFT
GFSFLIGNINLTHVELIVRILKVSIVSILLSTDKAWTFFHDYLFVFFIDGVQQILQIINE
ASATGPGSQSLLGLLIAPQTLSKLFSLLFVDWLGFIYIILYLIALYFIFFLIFKATIIYL
TALITIGMIIIMGPIFICFMLFNITRSLFENWLRQLISYALQPIILFTGIAFISMIIRTE
IYSTLGFAVCKHDFPNLGPINEIFGSFLEDIDPSLGHSIFYWWFPVPMKGGINNFHKANI
LVPKDHIIVDDSCKNDPDKCKHCAAYECIDERYIELPFLDLVKDAKRISNFINGKFVQLD
GILLIFVSIYLLSKFNDTAISTAQFIAGTSGNLTEIQKVNQQSYESAAQQMNRPLNYVAK
TVSAPVTSRVSAGKEQVRMFFAEKFENMMMGRLEKQALGSSANKTVQNEVKRKYGIDSKD
VKMNAITDYENGIAGLLKNLPKGNELKAKELSHMKFTQLRDKIAANKYEVKDYAALSKEQ
KAELDKSLKDANLRELASDANFTRDYQDAYKNAHQEMSGRGVGLFGKNIGVLRSWQEIEH
RVDTKRKLKEEKRVGIGEKIYAGYTGIKRGALTAIVGKDLRDAYEGNLTSAEWHDFEYND
PRLRTYSEKLKDDEKAREHEELQMHINKEALAAQADILSPEYLARLEKAGRHSDVEYYQE
LAQRKLIHEVHGRLFEEGEPVMMGDRFMREKATDSQMRDMIDNAHRKHAEFIDGDRYIRR
QEHYDIMYEKAQENLEQTYKELKDHFKRDDIKIEEMPALIAQKVKDTAEEAEIDQKITEE
LNNFNADVKNYEYSTEVLNKIEDRKQAITDEVNAQIDKINKYRENAKMQTYVKPIVNEGR
KLRKLEDHLRNMK

NT seq 3462 nt +upstreamnt +downstreamnt
atgaacaaaaatatttttattacattattaatatcgctattgctgctttctggttgtacc
ggtgatacttgtattgaccctgatgatttcggttttatcaaattcaatgtctctgctaga
tatgatccggaagaaattacttcaagacaggaaggtaatcaggtagcaccatggcgtgat
agtgcttataaagtaaacggctatcctttaaccattatggtaagaccgtggagttatata
cttggcgataaaaatacttcaggtcagttatctgcatggtgtccatggtatggtcaaaaa
aataacacaactactttggctgctttttgcgttaagctacaaccgtgtactttttgggat
aatagtagacttgatatgtgtactcctaatcctgcaaataaaaatgatgcaatgattagt
aatgctccatgtataatgacaaacggtgtcgggctttattttcttattgctgctaaaaat
accgatcccaatatttcaccggactcacagagtaaaccgcaaggtataactcagcattta
ggagaggagcttacttcgggctatgaattttatagtactagtagtataggacaattcttg
gaagccggaggtataaattatcaatataaaggtgaagataagtcaaaatatgctcaatct
cctctttattttaagattatagataaattttataatgataatagcgggcaatatagatta
gtaataaagtccggagttactgatactagacccgatccgctacaatttttaacggattta
ataaaaggagtattatttggtaaggatgggattataaagaaaacttatcaacaaataatt
gatacgtcgggttataggatgagtgtctcggctattttaactctatatataatgtttaca
ggcttttcctttttaataggtaatataaaccttactcatgtcgaacttatagttagaata
ttaaaagttagtatagtctcaatattattaagtactgataaagcttggacattttttcat
gattatttattcgtattttttattgatggggttcagcaaatactgcaaataattaatgaa
gcttcggctaccggtcccggttctcaaagcttgcttgggttacttattgctcctcaaact
ttatctaaattattttctttactatttgttgattggcttggttttatatatatcattcta
tatttaatagccttatattttattttctttcttatatttaaagccactattatctatcta
accgctcttataactatcggtatgattataattatgggaccgatatttatttgtttcatg
ttgtttaatataactcgttcgttatttgagaattggttaagacaattaatatcatatgca
ttacagcctataattttatttaccggtatcgcttttatttcaatgatcatcagaactgaa
atatattcaacgcttggttttgcagtatgtaaacatgattttcctaatttaggtccgata
aatgaaatattcggtagcttccttgaggatatagatccaagcctgggtcattcaatattt
tattggtggttcccagtaccgatgaaaggcggtataaataatttccacaaagcaaatata
ttagttcctaaagatcatataatagtagatgattcttgtaagaatgaccctgataaatgt
aagcattgtgctgcgtatgagtgtatagatgaacgctatattgaattaccgtttttagat
ttagttaaagatgcaaaaagaattagtaattttataaatgggaaatttgtccaacttgac
gggatattactaatttttgtgtctatttatttgctaagtaaatttaacgatactgctata
tcgacggcacaatttattgccggtacttcaggtaatttaacagaaatacaaaaagttaat
cagcaatcttatgaatctgcagcgcaacaaatgaatagaccgctaaattatgtggctaag
acggtaagtgcacctgtaactagccgtgtaagtgcagggaaagagcaagttcgtatgttt
tttgccgagaaatttgaaaatatgatgatgggaaggcttgaaaagcaagctctcggttct
tcagcaaataaaaccgtacaaaatgaggttaagcgaaaatacggtatagattctaaagat
gtaaaaatgaatgctattacggattatgaaaacggtattgcaggattattaaagaattta
cctaaggggaatgaattaaaagcaaaagaactatcgcacatgaagtttactcagcttcga
gataaaattgctgcaaataaatatgaagtgaaagattacgctgctttaagtaaagaacaa
aaagctgagcttgataagtcattaaaagatgctaacttacgtgaactcgctagcgatgca
aactttactagagattatcaagatgcttataaaaatgctcaccaagaaatgtccgggcga
ggtgttggtctgttcggtaagaatataggagtgcttagaagttggcaagagatagagcat
cgtgttgatacaaaacgtaaattaaaagaagaaaagcgtgtaggtataggcgaaaaaata
tatgcaggttatacaggaataaaaagaggagctttaactgcaatagtcggtaaagattta
cgtgatgcttatgagggtaatctaaccagtgccgaatggcatgattttgaatataacgat
ccaaggcttagaacttatagcgaaaaattaaaagatgatgaaaaagcacgagaacatgaa
gagctccaaatgcatattaataaggaggcgctagctgctcaagcagatatattatcaccg
gaatatctagcaagactagaaaaagcaggtagacatagtgatgtggaatattatcaagaa
ttagctcaaagaaagcttattcatgaggtgcatggtaggttatttgaggaaggtgaaccg
gtaatgatgggcgacagatttatgcgtgagaaagctactgattctcagatgcgcgatatg
atagataacgctcatagaaaacatgcagaatttatagatggagatcgatatattcgtcgc
caagagcattatgatattatgtacgagaaagcccaggaaaatttagagcaaacttataaa
gagcttaaagatcatttcaaaagagatgatatcaagatcgaagaaatgccggcattaata
gcacaaaaagttaaagataccgccgaggaagctgaaatagaccaaaagattacggaagag
cttaataactttaatgctgatgttaaaaattatgaatatagtactgaagtattaaataaa
atagaggatagaaagcaagccattaccgatgaagtcaatgctcagatcgataagattaat
aaatatagagaaaatgccaaaatgcaaacctatgtaaagcctatagtaaacgagggtaga
aagctaagaaaattagaagatcatttaagaaatatgaagtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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