KEGG   Rhinopithecus roxellana (golden snub-nosed monkey): 104655016
Entry
104655016         CDS       T03989                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
rro  Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03013  Nucleocytoplasmic transport
rro03015  mRNA surveillance pathway
rro03040  Spliceosome
rro05014  Amyotrophic lateral sclerosis
rro05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104655016 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    104655016 (ALYREF)
   03015 mRNA surveillance pathway
    104655016 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    104655016 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    104655016 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rro03019]
    104655016 (ALYREF)
   03041 Spliceosome [BR:rro03041]
    104655016 (ALYREF)
Messenger RNA biogenesis [BR:rro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104655016 (ALYREF)
    TREX complex
     104655016 (ALYREF)
Spliceosome [BR:rro03041]
 Complex C
  Other components
   EJC/TREX
    104655016 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104655016 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT RRM_occluded
Other DBs
NCBI-GeneID: 104655016
NCBI-ProteinID: XP_010352695
Position
19:39560992..39564880
AA seq 264 aa
MPDSAPAMADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVSRGGG
PIRNRPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNL
DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG
RPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGAGGFGGGGGTRRGTRGGARGRGRGAGRN
SKQQLSAEELDAQLDAYNARMDTS
NT seq 795 nt   +upstreamnt  +downstreamnt
atgcccgattccgcgcccgccatggccgacaaaatggacatgtctctggacgacatcatt
aaactgaaccggagccagcgaggcggccgcggcgggggccggggccgcggccgggccggc
tcccagggcggccgcggcggtggggcgcaggctgccgcgcgagtgagtcgaggcggcggg
cccatccggaaccggccggccatcgcccgcggcgcggccggcggaggcggcaggaaccga
ccggcgccctacagcaggccaaaacaacttcccgacaagtggcagcacgatcttttcgac
agtggcttcgggggtggtgccggcgtggagacgggtgggaaactgctggtgtccaatctg
gattttggagtttcagacgccgatattcaggaactctttgctgaatttggaacgctgaag
aaggcggctgtgcactatgatcgctctggccgcagcttaggaacagcagatgtgcacttt
gagcggaaagcagatgccctgaaggccatgaagcagtacaacggtgtccctctggatggc
cgccccatgaacattcagcttgtcacatcacagattgatacacagcggagacctgcacag
agcgtaaacagaggtggcatgactagaaaccgtggcgctggaggttttggtggtggtgga
ggcactcggaggggcacccgtggaggcgcccgtggaagaggcagaggtgccggcagaaat
tcaaagcagcagctttcggcagaggagctggatgcccagctggacgcctataatgcaaga
atggacaccagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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