KEGG   Rickettsia rickettsii R: RRR_01900
Entry
RRR_01900         CDS       T03663                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rrr  Rickettsia rickettsii R
Pathway
rrr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rrr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RRR_01900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rrr03400]
    RRR_01900
Enzymes [BR:rrr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     RRR_01900
DNA repair and recombination proteins [BR:rrr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RRR_01900
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 GEP5
Other DBs
NCBI-ProteinID: AJG32831
Position
352231..353046
AA seq 271 aa
MQIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQ
KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAMVNDIEIHNFYVPAGGDIPDIEVNTKFK
HKLEYIRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVE
LQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALFSMHLL
SEARDWFSPSDHVPYFVTFNLQMSSRGQATG
NT seq 816 nt   +upstreamnt  +downstreamnt
atgcagatagttacttggaatattaattcattgcgtctacggatcgatttattaagaaaa
ttagcatatgaacatcagccggatattattttacttcaagaaacaaaggtagctgactca
ttatttcctcttgaagttattaaaaatataggctatgaacatgtaatatattcagggcag
aaatcatataacggtgttgctattatttcaaaatttcctttgaataatgttttttcattg
gagttatataatagtgataaaaggcatatagcagctatggttaatgatatagaaatacat
aatttttatgttcctgccggcggtgatatacctgatatcgaggtaaatacaaaatttaag
cataagcttgaatatataaggttaatgcaggaatggttaacgactaaccgtactaaaaac
gataaaatgattattgttggggacttgaacattgctccgcatgaacatgatgtatggtct
agtaagcagttgcgaaatgttatcagccataccgatattgaacgctcgttattggtagag
ctacaaaatgcgttaggttttattgatagtagcagacatttcgtatcgcttgacgaaaaa
ttttatacttggtggagttatagaaatatagattggaaaaaatctaacagaggtagaaga
cttgatcatatttgggttagcgataatttaaaaggtgcattattttctatgcatttacta
tcagaagcacgtgattggttttcaccttcggatcatgtaccatattttgtgacttttaat
ttacagatgtcatcccgtggtcaagccacgggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system