KEGG   Roseiflexus sp. RS-1: RoseRS_2318
Entry
RoseRS_2318       CDS       T00542                                 
Name
(GenBank) ABC transporter related
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
rrs  Roseiflexus sp. RS-1
Pathway
rrs02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rrs00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RoseRS_2318
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rrs02000]
    RoseRS_2318
Transporters [BR:rrs02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    RoseRS_2318
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_25 AAA_29 AAA_16 AAA_22 RsgA_GTPase nSTAND1 AAA_30 AAA_23 AAA_33 NB-ARC AAA_24 AAA_28 nSTAND3 IstB_IS21 NACHT cobW
Other DBs
NCBI-ProteinID: ABQ90697
UniProt: A5UVP4
Position
2869728..2871425
AA seq 565 aa
MNKVDHIIHASGLVKIYKVAELEVVALQGLDLEVARGEFLALVGPSGSGKSTLLSLIGGL
DRPSAGQLVVDGLDLTTLTPTGLSAYRRDRVGFIWQQTTRNLLPYLSARENIELLMTFAG
RGGRERRAWTDELLEAVGIADKASTPVTQLSGGQQQRVAIACALANRPRILLGDEPTGEV
DWETAQRVLALLRDLRTRYGLTIVLVTHDPRVAEQADRVIAIRDGRTSTETRRDNGSTPG
SDTAAISGRTARARAAEELVVVDRAGRLQIPGDQRALAGIGRRARVELVDGGVLIRPVED
DRIAIPTEEPSGDHHHYLYEDQGSVDVAAPATPEPLITVAGVTRIFGTGARAVHALRGVD
LAVERGAFVALMGPSGSGKTTLLNIIGGLDRPTSGSVIVAGRRVDQMRADELASLRRQIG
FVFQSFALLPTASAFENVEMALRLTGQTPRQKWNARVRRVLAAVGLTDWADHRPYELSGG
QQQRVALARALVTYPQIILADEPTGDLDSRTGRRVLTMLRTLCDQEGVTLIMATHDPAVT
EFATIIYHLRDGLVIGCETRSAATA
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgaacaaagtcgatcacatcatccacgccagtggtctggtcaagatttacaaagtcgcc
gaactcgaggtggtggcgctccaggggttggacctggaagtggcgcggggcgagtttctg
gcgttggttggtccttccggctcagggaaatccacgctgctcagtctcatcggcgggctt
gatcgcccatccgccggacaactggtggtcgatggactcgacctgaccacactgacgcca
accgggttgagcgcctaccgccgtgatcgggtcgggttcatctggcagcagacgacgcgc
aacctgctgccatatctcagtgcgcgcgagaatatcgaactcttgatgactttcgcaggc
cgtggcggacgtgagcggcgcgcgtggacggatgagttgctggaagcagttggaatcgcg
gacaaggcttcgactccggtcacgcaactgtcgggcggtcagcaacagcgcgtcgccatc
gcctgcgccctggcgaaccgaccacgtatcctgctcggcgatgaaccaaccggcgaagta
gactgggaaacggcgcagcgcgtgctggcgctgctccgcgatctgcgcacacgctatggg
ctgacgatcgtgctggtcacgcatgatccgcgggtagcggagcaggcggatcgggtcatc
gccatccgcgacgggcgcaccagcaccgagacgcgccgcgataacggaagcacgccgggt
agtgacacagcggcaatatccggtcgtactgcgcgcgcgcgcgccgccgaagaactcgtc
gtcgttgatcgcgccggtcgtctgcaaatccccggcgatcagcgtgcacttgccgggatc
gggcggcgcgcgcgcgtcgaactggtggacggcggagtgctcattcgtccggtagaggac
gaccggatcgccattccaaccgaggaaccatcgggtgatcatcaccactacctgtacgag
gatcagggttccgttgatgtggccgcacctgcgacacccgaaccactcattaccgtcgca
ggggttacgcgcatattcggcacaggcgcacgtgccgtccatgccctgcgcggcgtcgat
cttgccgttgaacggggcgcatttgttgcgctcatgggtccgagcggcagtggtaagaca
acgctgctgaacattattggcggtctggatcgaccgacgagcgggagcgtgatcgtcgca
gggcggcgcgttgatcagatgcgcgccgacgaacttgccagcctgcggcgacagatcggc
ttcgtgtttcagagtttcgcgctgttgccaaccgcttccgcctttgagaacgtcgagatg
gcgttgcgcctgacaggacaaacaccacggcagaaatggaatgcgcgcgtgcgtcgcgtg
ctggcagccgtcggtctgaccgattgggcggatcatcgcccctacgagttgagcggcggt
cagcagcagcgcgtcgccctggcgcgagcgctggtcacctatccgcagatcatcctggca
gacgaaccaactggcgatctcgacagtcgcaccgggcgacgggtgctgacaatgctccgc
accctctgcgatcaggaaggggtgacactgatcatggcaactcacgatccggcagtgacc
gagtttgccacaatcatctatcatttgcgcgatggtctcgtcatcggatgtgaaacaaga
agtgcggcaacagcgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (2)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (37)   

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