KEGG   Rhodococcus ruber: CS378_23325
Entry
CS378_23325       CDS       T05142                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
rrz  Rhodococcus ruber
Pathway
rrz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rrz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CS378_23325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rrz03400]
    CS378_23325
Enzymes [BR:rrz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     CS378_23325
DNA repair and recombination proteins [BR:rrz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CS378_23325
SSDB
Motif
Pfam: UDG TAF1C_HB
Other DBs
NCBI-ProteinID: ATQ31381
UniProt: A0A098BU34
Position
complement(5094552..5095289)
AA seq 245 aa
MNPDIGRPRDLATLDACLIECRACPRLVAWREQVGREKRAAFRDEEYWARPVPGFGPADA
SLLIVGLAPAAHGGNRTGRMFTGDRSGDFLYAALHAAGLASQPTATHRGDGLELFGTRVT
SPVHCAPPANRPTPQERDTCRTWLDAELQLLTPTLRSIVVLGGFGWQALFPVLDDAGWVV
PRPRPRFGHGAGVELLPRGDAADRGPLHVFGCYHVSQQNTFTGRLTPAMLTAVLTDAARA
AGLHS
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaacccggatatcgggcggccacgcgacctggccacgctcgacgcctgcctgatcgag
tgccgggcctgcccccgcctggtcgcgtggcgcgagcaggtgggccgggagaagcgtgcc
gcattccgcgacgaggagtactgggcgcgtcccgtgcccgggttcggtccggcggacgcg
tccctgctgatcgtcggcctcgcgccggccgcgcacggcggcaaccggaccgggcggatg
ttcaccggcgaccgctcgggcgacttcctctacgccgcgctgcacgcggcgggcctggcg
tcgcagcccaccgcgacgcaccgcggcgacggcctcgagctgttcggcacccgcgtcacg
tcgccggtgcactgcgcgcccccggccaaccggccgacgccgcaggaacgggacacgtgc
cgtacctggctcgacgcggagctgcagctgctgacgccgacgctgcgctcgatcgtggtg
ctcggcggcttcggatggcaggcgctgttcccggtgctcgacgacgccggctgggtcgtg
ccgcgtccgcgcccccgattcgggcacggggcgggggtggaactgctgccgcgcggcgac
gccgcggaccgcgggccgttacacgtgttcgggtgctatcacgtgagccagcagaacacg
ttcaccggccggctcaccccggccatgctcaccgccgtgctcacggacgcggcgcgggct
gccggactgcactcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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