KEGG   Cereibacter sphaeroides 2.4.1: RSP_0572
Entry
RSP_0572          CDS       T00284                                 
Name
(GenBank) putative exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rsp  Cereibacter sphaeroides 2.4.1
Pathway
rsp03030  DNA replication
rsp03430  Mismatch repair
rsp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RSP_0572
   03430 Mismatch repair
    RSP_0572
   03440 Homologous recombination
    RSP_0572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsp03032]
    RSP_0572
   03400 DNA repair and recombination proteins [BR:rsp03400]
    RSP_0572
Enzymes [BR:rsp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RSP_0572
DNA replication proteins [BR:rsp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RSP_0572
DNA repair and recombination proteins [BR:rsp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RSP_0572
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 RNase_H_2 PAS PAS_4
Other DBs
NCBI-ProteinID: ABA79746
UniProt: Q3J0D8
Position
1:complement(2311483..2313570)
AA seq 695 aa
MLDRLNLRVRILLFFAALAGGANVAVAIGLFLAYRRLDAPELLPAFEQVGLVAGLVILGL
VTWIWYLFDANVALPIIRLASKLRARAHARIDGGIEEPTARYLGDLAPAASATALTLAET
RDALAESVARETSRLSSEKARLEALLSDVPVGLLLCSGDHQLVFYNGPATDLMNTAGAPG
LDRNLFDYLRDGPIRHAHRRLIEAGDPDAASDILCTTVVGARVLAARMRLIGGETTKPGY
VLTLRDVTSALASYARREALLAEVFDRIRRPAANLQTLFEVLPPGSCPPPDMDRALRQEA
AGLAAAVTELGARHDESRHDGWPLSLTRASDLLDGLHARMEQAGLSAEIGEAPLLLRCNG
FEVIGLVATLAARVAARRTGHDFRVTLTEDGTEAMLRLVWHGEPLPVGLLEDWLGEPLEP
GVPEVTGRTVLSTHTTEIWPEPAGAGASALCLPLRTARRTGRRPRPIPRAVVYDFELLSK
ARYEKVAEARLEDLTYVVFDTETTGLMPSQDEIVQIAAVRIVNGRRVEAEVLDTLVNPHR
PIPPSSTEVHGITDAMVAEAPDIVEVGRRFHKFAEGAVLVAHNAPFDMEFLRRAEPLIGR
RFDNPILDTVLLSAVLFGQSDVHSLDALTHRLGITIPEEARHTAIGDTVATADAFLKLLP
MLQGRGFETFGAVLSEVRRHGRLLKDLNEPHLTDA
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgctcgaccgcctcaacctgcgcgtgcggatcctgctcttcttcgcggcgctcgcgggc
ggggcgaatgtggcggtggcgatcgggctcttcctcgcctaccggcgcctcgacgccccc
gagcttctgcccgccttcgagcaggtgggtctcgtcgcggggctcgtgatcctcgggctc
gtcacctggatctggtatctcttcgacgccaatgtggcgctgccgatcatccggctggcc
tcgaagctgcgcgcccgcgcccatgcccgcatcgacggcggcatcgaggagccgaccgcc
cgctatctgggcgatctggcgccggccgcctcggcgaccgccctcaccctcgccgagacg
cgcgacgcgctggccgagtcggtggcgcgcgagacctcgcggctgtcctcggagaaggcg
cggctcgaggcgcttctgtcggacgtgccggtggggctgctgctctgctcgggcgaccat
cagctcgtcttctacaacggccccgcgaccgacctgatgaatacggccggcgcgccgggg
ctcgaccgcaacctcttcgactatctgcgcgacgggccgatccgccatgcgcaccggcgg
ctgatcgaggcgggcgatcccgatgcggcctcggacatcctctgcaccacggtcgtgggg
gcgcgggtgctggccgcgcggatgcggctgatcgggggcgagacgacgaagcccggctat
gtgctcacgctgcgcgacgtgacctcggcgctggcctcctacgcccggcgcgaggcgctg
ctggccgaggtcttcgaccggatccggcggccggcggcgaacctccagacgctgttcgag
gtgctgccgcccggcagctgcccgccccctgacatggaccgcgcgctgcggcaggaggcg
gcgggtctcgccgccgccgtgaccgaactcggcgcgcgccacgacgagagccgccacgac
ggctggccgctgtcgctcacgcgcgcctcggacctgctcgacgggctgcacgcccggatg
gagcaggcgggcctctcggccgagatcggcgaggcgccgctcctcctgcgctgcaacggc
ttcgaggtgatcggcctcgtggcgacgctggccgcccgggtggcggcccggcgcaccggc
cacgatttccgcgtgaccctgaccgaggacggcaccgaggccatgctgcggctcgtctgg
cacggcgagccgctgcccgtgggccttctcgaggactggctcggcgagccgctcgagccg
ggcgtgcccgaggtgacggggcgcacggtgctttcgacccacacgaccgagatctggccc
gagcccgcgggggccggcgcctccgccctctgcctgccgctgcgcaccgcgcgccgcacg
ggccgccgcccgcggcccattccgcgcgccgtggtctatgatttcgagcttctgtcgaag
gcgcgctacgagaaggtggccgaggcgcggctcgaggatctgacctatgtcgtcttcgat
accgagacgacgggcctcatgccctcgcaggacgagatcgtgcagatcgccgcggtgcgg
atcgtgaacggccgccgggtcgaggccgaggtgctcgacacgctggtcaatccgcaccgg
ccgatcccgccctcctcgaccgaggtccatggcatcaccgatgcgatggtggccgaggcg
cccgacatcgtcgaggtggggcgccgcttccacaagttcgccgagggcgcggtgctggtg
gcccacaacgcccccttcgacatggaattcctgcgccgggccgagccgctgatcggccgc
cgcttcgacaatccgatcctcgataccgtgctgctctcggcggtgctcttcgggcagagc
gacgtgcacagtctcgacgcgctgacccaccggctcggtatcaccatccccgaggaggcg
cggcacacggccatcggcgacacggtggccacggcggatgccttcctcaagctgctgccg
atgctgcaggggcgggggttcgagaccttcggcgccgtgctctcggaggtgcgccggcac
ggacggctgctcaaggacctgaacgagccgcatctgaccgacgcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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