KEGG T00284: RSP

Rhodobacter sphaeroides 2.4.1: RSP_4050

Entry

RSP_4050 CDS T00284

Gene name

pdhB

Definition

branched-chain alpha-keto acid dehydrogenase subunit E2 (EC:2.3.1.12)

Orthology

K00627

pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]

Organism

rsp Rhodobacter sphaeroides 2.4.1

Pathway

rsp00010	Glycolysis / Gluconeogenesis
rsp00020	Citrate cycle (TCA cycle)
rsp00620	Pyruvate metabolism
rsp01100	Metabolic pathways
rsp01110	Biosynthesis of secondary metabolites
rsp01120	Microbial metabolism in diverse environments

Module

rsp_M00307

Pyruvate oxidation, pyruvate => acetyl-CoA

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:rsp00010]
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:rsp00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:rsp00620]

SSDB

Motif

Pfam:

2-oxoacid_dh Biotin_lipoyl E3_binding Biotin_lipoyl_2 QRPTase_N HlyD_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:complement(1121645..1122973)

AA seq 442 aa
MATEILMPALSPTMEEGTLAKWLKKEGDEVRSGDIIAEIETDKATMEFEAVDEGILGKIL
IAEGTAGVKVNTPIAVLVEEGESVDAVSSAKVPEPQEPADEAAPAQGAPKEAPAPAAKAP
AAQAARSEGERVFASPLARRIAKEKGIDLAAVQGSGPRGRIVKADVEGAQPSAAPAAKAD
AAAPKAEAPAAAAAPVAAPAASAASVAKLFADRDYEEVTLDGMRKTIAARLSEAKQTIPH
FYLRREVALDALMAFRADLNAKLESRGVKLSVNDFIIKACAVALQQVPNANAVWAGDRIL
RLKPSDVAVAVAIEGGLFTPVLRDAHQKSLSALSAEMKDLAARARTKKLAPHEYQGGSFA
ISNLGMFGVENFDAVINPPHGSILAVGAGIRKPVVGKDGAITTATMMSMTLSVDHRVIDG
ALGAEFLKAIVENLENPIAMLA

NT seq 1329 nt +upstreamnt +downstreamnt
atggcaaccgagatcctgatgcccgcgctgtctccgacgatggaggaggggacgctcgcg
aaatggctgaagaaggaaggggatgaggtccgctcgggcgacatcatcgccgagatcgag
accgacaaggccaccatggagttcgaggcggtcgacgagggcatcctcggcaagatcctg
atcgccgagggcacggcaggcgtgaaggtcaacacgcccatcgccgtgctggtggaagag
ggcgagagcgtggacgccgtgtcctccgccaaggtgccggagccgcaggaaccggccgac
gaggccgcacccgcgcagggggctccgaaggaggcccctgccccggccgccaaggcgccc
gcggcgcaggcggcccgatccgagggagagcgcgtcttcgcctcgccgctcgcccgccgg
atcgccaaggagaaggggatcgaccttgccgcggtgcagggctcgggcccgcgcggccgg
atcgtgaaggccgatgtcgagggggcgcaaccctcggccgctcccgccgccaaggcggac
gccgcggcaccgaaggcagaagcgcccgccgctgcggccgcgcccgtcgccgcgccggcc
gcctccgcggcttcggtggcgaagctcttcgcggatcgcgactatgaggaagtgaccctc
gacgggatgcgcaagaccattgccgcgcgtctgtccgaggccaagcagaccatcccgcac
ttctacctccggcgcgaggtggctctggatgcgctgatggctttccgcgccgatctcaat
gcgaagctcgagagccggggcgtaaagctctcggtcaacgacttcatcatcaaggcctgt
gcggtggcgctccagcaggtgccgaacgcgaatgccgtctgggccggagaccggatcctg
cggctgaagccctcggacgtggcggtggccgtggcgatcgagggcgggctcttcacgccg
gtcctgcgcgatgcgcaccagaagagcctgtcggcgctgtcggccgagatgaaggatctc
gccgcccgcgcccgcacgaagaagctcgcaccgcacgaatatcagggcggcagcttcgcg
atctcgaacctcggcatgttcggggtcgagaatttcgatgcggtcatcaacccgccgcac
ggctcgatcctcgccgtcggcgcaggcatccgcaagccggtggtgggcaaggacggcgcg
atcacgacggccaccatgatgtcgatgacgctctcggtggaccaccgggtgatcgacggc
gcgctgggggccgagttcctgaaggcgatcgtcgagaatctcgagaacccgatcgccatg
ctggcctga

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RSP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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