KEGG   Rhodovulum sulfidophilum: NHU_04278
Entry
NHU_04278         CDS       T04143                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rsu  Rhodovulum sulfidophilum
Pathway
rsu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NHU_04278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsu03400]
    NHU_04278
Enzymes [BR:rsu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     NHU_04278
DNA repair and recombination proteins [BR:rsu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     NHU_04278
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: BAQ71391
UniProt: A0A0D6B8M6
Position
4373337..4374125
AA seq 262 aa
MPFTLATWNINSVRLRAPLVARLMEEEAPDILCLQECKSPVEKLPLEVFAPLGYTHVVAR
GQKGYNGVAILSKLPLEDAGSVDFAGLDQARHVAARLENGVLLHNFYVPAGGDVPDREVN
VKFGQKLDFLTGMRDFFRESRPERSILVGDLNIAPGEEDVWSHKQLLKIVSHTPVEVEHL
GAAQEAGGWVDVTRAHIPEGKLYSWWSYRARDWDAADKGRRLDHLWATPDIAGAAADSRI
LRPVRGWEKPSDHVPVFARFDL
NT seq 789 nt   +upstreamnt  +downstreamnt
atgcccttcaccctcgccacctggaacatcaattcggtccgcctgcgcgccccgctggtc
gcccgtctgatggaggaggaagcccccgacatcctctgtctgcaggaatgcaagagcccg
gtcgagaagctgccgctcgaggtcttcgcgccgctcggctatacccatgtcgtggcgcgc
ggccaaaagggctataacggcgtcgcgatcctgtcgaagctgccgctcgaggatgcgggc
tcggtcgatttcgccgggctcgaccaggcccggcacgtggccgcccggctggaaaacggc
gtgctgctgcacaatttctacgttccggcgggcggcgatgtgcccgaccgcgaggtgaac
gtcaaattcggccagaagctcgattttctcaccgggatgcgcgatttcttccgcgaaagc
cgccccgagcgctcgatcctcgtcggcgatctcaatatcgccccgggtgaggaggatgtc
tggtcgcataagcagcttctgaagatcgtgagccacaccccggtcgaggtcgagcatctc
ggcgcggcgcaggaggcgggcggctgggtcgacgtgacccgggcgcatattcccgaaggc
aagctctattcctggtggtcctaccgggcgcgcgactgggacgcggccgacaaggggcgc
cggctcgaccatctctgggcgacgcccgacattgccggtgcggccgcggacagccggatc
ctgaggccggtgcgcggctgggagaagccctctgaccatgtaccggttttcgcgcgcttc
gatctctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (31)   

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