KEGG   Rickettsia slovaca D-CWPP: MC3_03515
Entry
MC3_03515         CDS       T01801                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
rsw  Rickettsia slovaca D-CWPP
Pathway
rsw03420  Nucleotide excision repair
rsw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rsw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MC3_03515
   03430 Mismatch repair
    MC3_03515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsw03400]
    MC3_03515
Enzymes [BR:rsw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MC3_03515
DNA repair and recombination proteins [BR:rsw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MC3_03515
   MMR (mismatch excision repair)
    Other MMR factors
     MC3_03515
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 AAA_11 AAA_12 DEAD DUF87 ResIII
Other DBs
NCBI-ProteinID: AFD19648
UniProt: H8LPG4
Position
613791..615752
AA seq 653 aa
MQNQDFIHTLNPEQQKAVLHTEGPLLLLAGAGTGKTKVLTSRIANIIHQNLASPQNILAV
TFTNKAAKEMAERVNSLINCYGLNIGTFHSMAARILRDQIEHLNLGLNNRFTIISHDDQL
KLVKDIVKLKDIDTKKYAPKLIHIIISRWKDQGLLPTKLSVSDTNLPLQRVAKLVYEEYQ
KNLLISNVLDFGDLLLYNNELFIKNSEILRYYQEKYRYILIDEYQDTNVVQYLWARMLAS
LYKNICCVGDDDQSIYGWRGAEVGNILRFEKDFAGATIIKLEQNYRSTLPILAAASNVIN
NNKNRHGKTLWTDRENGEKIKIISCWSDKEEARYIAGEIDKLVRENRYNAGNIAILVRAG
FQTRSFEEAFINSAMPYKIIGGLRFYERMEIRDVLAYIRISLNQNDNLALERIINVPKRA
IGAASLNKIRGYALERNISNFAAIKEMLEIGEIKAKSYETLKDLVTKIDNWYERFSIDAP
INVVKAILDDSGYLEMLQEEKTEEAFGRIENINEMLRAIAEFNDVHDFIEHSSLVMENEV
LETNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQRSLDEDGEKGLEEERRIAYVGI
TRAKKDLYITHAESRKIFYEIVRSYPSRFITEIPDEITIRTSSMKKYNSFYKF
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgcaaaatcaagatttcatacatacattaaatccagagcagcaaaaagcagttcttcac
actgaaggaccgcttttattgcttgcaggtgcagggacaggtaaaacaaaggtacttacc
tcaagaatagctaatattattcaccaaaatttagcctcacctcaaaatattctagccgtt
acttttactaataaagctgctaaagaaatggctgaaagagttaatagtctaattaattgc
tatggtcttaatataggcactttccactcaatggcagctaggatattacgtgaccagatt
gagcatttaaatcttggtttaaataatagatttactattattagtcatgatgatcaatta
aaactagtgaaagatatagtaaagctaaaagatattgatactaaaaaatatgctcctaaa
ttaatacatatcataatttctagatggaaagatcaaggattattaccaactaaactatca
gtatcagatactaatttaccgctgcagagggttgcaaaacttgtatacgaagaatatcag
aaaaatttacttatttctaatgttttagattttggagatttgctactttataataatgag
ctttttattaaaaattctgaaatactaagatattaccaagaaaaatatcgatatatttta
attgatgaatatcaagacactaacgttgtccagtatttatgggcaagaatgctcgcaagt
ttatataaaaatatttgttgtgtaggggatgatgatcaatctatttatggttggcgagga
gcagaagtcgggaatatattacgttttgaaaaagattttgcaggtgcaacaattattaaa
ttagagcagaattatagatcaactttgccaatacttgctgctgcttccaatgttatcaat
aataataaaaaccgtcacggtaaaacgttatggacggatagggaaaacggtgaaaagata
aaaattatctcttgttggagtgataaagaagaagcaagatatatagccggtgaaatagat
aagttagtgcgagaaaaccggtataatgccggcaatattgcaatattagtacgagccgga
tttcaaacaagaagttttgaggaagcgtttataaatagtgctatgccttataaaattata
ggcggtttgcggttctatgaacgtatggaaataagagacgtgcttgcttatatccgtata
tctttgaatcaaaatgacaatctagcacttgaacgtattataaatgtgccgaaaagggca
ataggtgcagctagcttaaataaaattagaggctatgcacttgagcgaaatatttctaat
ttcgcagccattaaagaaatgctagaaataggtgagattaaagcaaaatcatatgaaact
ctaaaagatttggttactaaaatcgataattggtacgaaagatttagtatagatgctcca
ataaacgtagttaaagcaatacttgatgattccggttatcttgaaatgcttcaagaagaa
aaaaccgaagaagcattcggtagaatcgaaaatattaacgaaatgcttagagctattgct
gaatttaacgatgttcatgattttatcgaacattcaagcttagttatggaaaatgaagtg
cttgaaaccaattacggtggctctgttactataatgaccctgcacgcagctaaagggctt
gagtttgacgtggtatttttaccgggctgggaagagggggtatttccgtctcaaagatct
ctagacgaagacggcgaaaaaggcttagaagaagaacgccgcattgcttatgtcggtatt
acgagagccaaaaaagacctctacattactcatgctgaaagcagaaaaatattttatgaa
atagtccgttcttacccttcaaggttcataactgaaatccctgatgaaattacgatcagg
acctcttctatgaaaaaatacaattctttttataagttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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