KEGG   Rathayibacter toxicus WAC3373: APU90_01225
Entry
APU90_01225       CDS       T04269                                 
Name
(GenBank) DNA repair protein RecO
  KO
K03584  DNA repair protein RecO (recombination protein O)
Organism
rtc  Rathayibacter toxicus WAC3373
Pathway
rtc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rtc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    APU90_01225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtc03400]
    APU90_01225
DNA repair and recombination proteins [BR:rtc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     APU90_01225
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      APU90_01225
SSDB
Motif
Pfam: RecO_C RecO_N RecO_N_2 TP1 ArfGap
Other DBs
NCBI-ProteinID: ALS56578
UniProt: A0A0C5BEQ5
Position
complement(265495..266223)
AA seq 242 aa
MPSYRDEVVVLRTHKLGEADRIITILSRRHGKVRAVAKGVRKTGSKFGSRLEPFMVADVQ
LYEGRSLDIITQAESLAVYGALIAADYDSYTAANAMVETADRLTDADSDGSLQHYLLLVG
ALRSLARSEHEPLLILDSYLLRALSVAGWAPSFDDCARCGASGPHGAVVVQLGGVVCVEC
TPPGAPRVLPEVIVLLAALLTGDWGHAEAAEPVTRSRASGVVAAYAQWHLERGLKSLEHV
TR
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcccagctaccgtgatgaagttgtggtgcttcgcacacacaagttgggcgaagccgac
cggataatcacgatactctcacgcagacacggtaaagtccgcgctgttgctaagggtgtg
cgcaagaccgggtccaagtttggctcgaggcttgagcccttcatggtcgccgatgtgcag
ctctatgagggcagaagcctggacatcatcactcaggccgagtcgctcgcggtctacggt
gcgctcattgctgccgactacgacagctacacggcggccaacgcgatggtcgaaacagct
gatcgtctgactgatgctgactctgacgggtcgctgcaacactatctcctgctcgtcggc
gctctgcgctcgttggcacgttcggagcatgagccgctgctgattcttgactcttatctg
cttcgtgccctgtctgttgccggttgggcaccgagctttgatgactgcgcccgttgtggc
gcatcgggcccgcacggcgctgtcgttgtgcagctcggaggcgttgtctgcgtcgagtgc
actcctcccggtgccccgcgggtactgcctgaggtgatcgtcctgctcgccgccctgctc
acgggagactgggggcacgctgaagcggctgagcctgtgacgcgctcccgcgccagcggc
gtcgtagctgcctacgctcagtggcatctcgaacgtggactgaaatctttggagcacgtc
acccgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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