KEGG   Rathayibacter tritici: A6122_0667
Entry
A6122_0667        CDS       T04388                                 
Name
(GenBank) long-chain-fatty-acid--CoA ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
rtn  Rathayibacter tritici
Pathway
rtn00061  Fatty acid biosynthesis
rtn00071  Fatty acid degradation
rtn01100  Metabolic pathways
rtn01212  Fatty acid metabolism
rtn02024  Quorum sensing
Module
rtn_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rtn00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    A6122_0667
   00071 Fatty acid degradation
    A6122_0667
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A6122_0667
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rtn01004]
    A6122_0667
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtn04147]
    A6122_0667
Enzymes [BR:rtn01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     A6122_0667
Lipid biosynthesis proteins [BR:rtn01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   A6122_0667
Exosome [BR:rtn04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   A6122_0667
  Exosomal proteins of breast cancer cells
   A6122_0667
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: AND15823
UniProt: A0A160KR02
Position
complement(724676..726274)
AA seq 532 aa
MSSTEPRTAEAPAAPPPPAAGIGTLSVAAILAEAARRTPDTIAVRAGSQAVDYATLWRQT
RAYAGALRARGIGPGDRVALLIPNVPDFPRGYFAVLALGAVVVPVHALLKHDEIAYVLRD
SGAAALICAAPLLAEGAAGADLAGVPVLSVMVPDGADSLPPRLEDLAAAATAIDGYVPRS
PSDTATILYTSGTTGRPKGAEGTHVAIVSQSDVLLMNTFDLHRGDVVLGALPLFHTFGQV
CAMNTAFRTAATVVLVPKFDGDAALEAMIAHSCTVFEGVPTMYVALLDAATRRTDRPPLR
YAVSGGAALPVAVIERFREVFGVEIYEGYGLTETSPVATFNHVGVPPRAGTVGTPIWGVE
VEVARPDVADRIELLPRGELGEIVVRGHNLMKGYLGNPAATAEAVVDGWFRTGDLGTKDD
EDYVRILDRTKDMIIRNGYNVYPREVEEVLIGHPAVQNAAVFGIPDERHGQEVMAAVILA
PTATATAEELIAHANEHLAAFKFPRRIEFVDALPLGPSGKVLKRDLVARYTG
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgagcagcaccgaaccccgcacggccgaggcccccgccgctcccccaccgccggccgcc
ggcatcggcaccctctccgtcgcggcgatcctcgcggaggcggcacggcgcacccccgac
acgatcgccgtccgcgctggcagccaggccgtcgactacgcgactctctggcggcagacc
cgcgcctatgccggagcgctgcgcgctcgagggatcggcccgggcgaccgcgtggcgctg
ctgatcccgaacgtcccggattttccgcgcggctatttcgcggtgctcgcgctcggcgcc
gtggtggtccccgtgcacgctctgctcaagcacgacgaaatcgcctatgtccttcgcgac
tccggagccgccgcgctgatctgcgcggcccctctgctcgccgagggcgccgcgggagcg
gatctcgccggggtgcccgtgctgagcgtgatggtgcccgacggcgccgactcactcccg
ccgcgcctggaggacctcgccgccgccgcgaccgcgatcgacggctacgtgccccgctcc
ccctccgacacggcgacaatcctctacaccagcggcaccaccggtcgcccgaagggggcg
gaggggacgcacgtcgcgatcgtctcgcagtcggacgtgcttctgatgaacaccttcgac
ctgcaccgcggcgacgtggtgctgggcgcgctgccgctgttccacactttcgggcaggtc
tgcgcgatgaacacggccttccgcaccgccgcgaccgtcgtactggtgccgaagttcgac
ggtgatgccgcgctcgaggcgatgatcgcccacagctgcacagtgttcgagggggtaccc
acgatgtatgtcgccctgctcgacgcggcgacccgacgcacggaccggccgccgctgcgc
tacgcggtctcgggaggcgcggctctgcccgtcgccgtgatcgagcggttccgcgaggtg
ttcggcgtcgagatctatgagggctacgggctcaccgagacgtccccggtcgccaccttc
aaccacgtcggggttccgccccgggcgggcaccgtcggcacaccgatctggggcgtcgag
gtcgaggtcgcccggcccgacgtcgccgaccgcatcgagctgctcccgcgcggcgagctc
ggcgagatcgtggtccgcggtcacaacctgatgaagggctacctcggcaatccggcggct
accgcggaggctgtcgtcgacggctggttccgcactggtgacctgggcacgaaggacgac
gaggactacgtccgcatcctggaccggacgaaggacatgatcatccgcaacggctacaac
gtgtacccgcgggaggtcgaggaagtgctgatcgggcacccggctgtgcagaacgcagcg
gtcttcggcatcccggacgagcgtcacggccaggaggtgatggccgcggtgatcctcgcc
ccgaccgcgaccgccacggccgaggagctgattgcccacgcgaatgagcacctcgcggcg
ttcaagttcccgcgccgcatcgagttcgtcgacgcgctccccctgggcccgagcggcaag
gtcctcaagcgcgacctcgtcgcccgctacaccggctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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