KEGG   Ruminococcus torques: RTO_23280
Entry
RTO_23280         CDS       T02606                                 
Name
(GenBank) Transcriptional antiterminator
Organism
rto  Ruminococcus torques
SSDB
Motif
Pfam: PTS_EIIA_2 PRD HTH_11 Mga HTH_Mga HTH_DeoR PTS_IIB GerE Sigma70_r4
Other DBs
NCBI-ProteinID: CBL26822
UniProt: D4M6G0
Position
complement(2412762..2414693)
AA seq 643 aa
MLLAREKKIVTLLIEHEDKLTTTQIATSLKVSSRTIKADIKKINEELEKHSCRINSQQGV
GLWIEYDNHEAKKYLKEVTRDTADLYLSPEVRKYHLAVELLLQDDYTSMEALAKEYYISK
ATVLNDLNELDELWEHYGVHFIKKVKYGIKVEGNESQIRSALLEALKRAGGRQKVTVSNI
QSHFTSVELKDLREIIGQMEGRFQFILTDISVGELMLDLAVMLERLSAGKTMDHEGSIPG
RESRRMDFVLGYLKEHLTESFGIEIPDTEDCYLRICLSGLRFHVPMEKEQSLKEKRERNP
EMFDYMMDLLMECDRKFYLQLEEDDELINALMDHLECMVLRLHSKMYTYNPILDAIKKEL
FYEYEIASFFMSKFTVKYGFNPTEDEIGFITFHIGTSIERMKQKQHQKFTATLVCMTGFG
TSQFLRAKLAGSFSNLEIREVFSASRLSEIKLEKQDFVIATVPIELEGIPVIQVSPVLSE
TDIKKIQKFLMKKKEYEPETQKNYEYLQQFLHSEIAMFDCDLKSKEEVIHLLGSRMITEG
YVDEGFIDSVFERENLSETALGNLIAIPHAFEGHIKKQGIGIMTLKKPINWGDEKVQLIF
LLSLDVNSKDYIKGIFGDVLELTKDKKAMEVILKARRFSEMFR
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgcttttagctagagagaagaaaattgttacgctgctcatagaacatgaggacaaattg
acaaccacacagattgctacttcattgaaggttagttccagaacgatcaaagctgatatt
aagaaaatcaatgaggagttggagaaacattcctgtaggattaacagtcagcagggtgta
ggactctggattgagtatgacaaccatgaggctaaaaaatacctgaaagaagtcacaagg
gatacagcagatttgtatctgtctccggaggtcagaaagtatcatctggctgttgagctt
ctcttacaggatgattacacatctatggaggctcttgcaaaggagtattacataagcaaa
gctactgtattgaatgatctgaatgagttggatgagctgtgggaacattatggagttcac
ttcattaagaaagtgaaatatggaattaaagtggagggaaatgaaagtcagatacgttcg
gcgttgttagaagcgctcaaaagagccggtggaagacaaaaagtaactgtatcgaatatt
caaagccatttcacctcagtagaactgaaggatttaagagaaatcattggtcaaatggaa
ggaagatttcagtttatactcactgacatatcagtaggtgaactgatgctggatctggcc
gtaatgctggaacgattatccgcagggaagacgatggaccatgaaggctctatcccggga
agagaatcaaggcggatggatttcgtgttaggttatctgaaagaacatctgacagaatcc
tttggaattgagattccggatacagaagattgttatctgagaatttgtttgagtggtctt
cgctttcatgttccaatggaaaaagagcagtctcttaaagagaaaagagaacgcaatcca
gagatgtttgattacatgatggatttgttgatggaatgtgacagaaagttctatctacag
ttagaggaagacgatgaattgatcaatgctttgatggatcatttggaatgcatggtactg
agactacacagtaaaatgtatacttacaatccgattctggatgcgataaagaaagaattg
ttttatgaatatgaaattgcatctttctttatgtcaaagtttacagttaagtacggattt
aatccaacagaagatgagattggttttattacatttcatattgggacatcgattgaaaga
atgaaacaaaaacaacatcaaaaatttactgcaacgttagtttgtatgacaggatttggt
acgtctcagttcttgcgagctaagctggcaggaagtttttcgaatttggaaattagggaa
gttttctcagcatcaagattatcagaaatcaaactagaaaaacaagattttgtgattgct
acagttccgattgaattggaaggaattccggttattcaggtttccccggttttaagtgag
acagacatcaagaagattcagaagtttctgatgaagaagaaggaatatgaaccagaaact
caaaagaattatgaatacctgcagcagtttctgcacagtgagattgcgatgtttgactgt
gatctaaaatcaaaagaggaagtgattcatcttctcggaagcaggatgatcacagaagga
tatgtggatgaaggatttattgattcggtatttgaacgagaaaatctttcggagacggcg
cttggaaacttaatcgcaattccacatgcatttgaaggccatataaagaaacagggaatc
ggaataatgacactgaaaaaaccgattaactggggtgacgaaaaagttcagctgatcttt
ctactgtctttggatgttaattcaaaagattacatcaaaggaatctttggagacgtattg
gagttgacaaaagacaagaaggcgatggaagtaatattaaaggccaggagattttcagaa
atgttcagatag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

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