KEGG   Rhizobium tropici: RTCIAT899_CH00060
Entry
RTCIAT899_CH00060 CDS       T02432                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rtr  Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:rtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rtr03032]
    RTCIAT899_CH00060 (gyrB)
   03400 DNA repair and recombination proteins [BR:rtr03400]
    RTCIAT899_CH00060 (gyrB)
Enzymes [BR:rtr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RTCIAT899_CH00060 (gyrB)
DNA replication proteins [BR:rtr03032]
 Prokaryotic type
  DNA Topoisomerases
   RTCIAT899_CH00060 (gyrB)
DNA repair and recombination proteins [BR:rtr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RTCIAT899_CH00060 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert Toprim_4 HATPase_c_3
Other DBs
NCBI-ProteinID: AGB69445
Position
8414..10849
AA seq 811 aa
MTDTSVTDNGGNAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADIVTVTLNPDGSVTVTDNGRGIPTDIHSGEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVWLKLKIRRQGKIHEMSFTHGVADAPLKETGDAGDETGTEVSF
MPSSETFTMIEFDYSTLEHRLRELAFLNSGVRILLTDKRHSDVKQEELLYDGGLEAFVSY
LDRAKKPLVQKPVSIRSEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRAA
LTRQITSYADSSGITKKEKVTLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSTWLEEHPSEAKVLVGKVVEAAAAREAARKARELTRRKGALDIASLPGKLA
DCSERDPAKSEVFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTGIGKDEFNAEKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPDLIERGHLY
IAQPPLYKVTRGKSVQYVKDEKALEEYLIGQGTDDVSLRLGNGEVRTGQDLREAIYDALR
LRTLIDNLHSRYNRSVVEQAAIAGALNAEMVSDPARAEALVNDVAKRLDVIAEETERGWT
GAVTGEGGLRFERTVRGVKEVVFLDMALIGSQDARLIDQLGARLKEVYITPPKLVRRDGE
TEISGPRQLLDTIFAGGRKGLTLQRYKGLGEMNAEQLWETTLDPNVRSLLQVRVTDATDA
DGLFARLMGDEVEPRREFIQDNALNVANLDI
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgaccgacacatccgtaaccgataatggtggcaacgccgagtatggcgcagattccatc
aaggtcctgaaaggcctcgatgcggtgcgtaagcgtcccggcatgtatatcggcgatacg
gatgacggttcgggtctgcatcacatggtctacgaagtcgtcgacaacgccattgacgaa
gccttggccggccatgccgatatcgtaacggtgacgctcaatcccgacggctcggtcacg
gttaccgataacggccgcggcatcccgacggatattcatagcggcgaaggtgtttcggcg
gctgaggttatcatgacccagcttcatgccggcggtaagttcgaccagaattcctataag
gtttccggcggcctgcatggcgtcggcgtttcggttgttaacgcgctgtctgtctggctg
aagctgaagatccgccgccagggcaagatccatgaaatgagcttcacccatggcgtggcg
gatgcaccgctgaaggaaacgggtgatgcgggcgacgagaccggcaccgaagtcagcttc
atgccgagctccgaaaccttcaccatgattgagttcgattacagcacgctcgagcatcgt
ctgcgcgaactcgcttttctgaattccggtgttcgcatccttttgaccgacaagcgtcat
tccgacgtcaaacaggaagagttgctttacgacggcggcctggaagccttcgtctcctat
ctcgatcgcgccaagaagccgctggttcaaaagccggtttcgatccgcagcgagaaggac
ggaatcaccgtcgaagttgcgatgtggtggaacgacagctaccacgaaaacgtactctgc
ttcaccaacaacattccgcagcgcgacggcggcacccacatggccggtttccgcgctgcc
ctgacgcgccagatcacctcctatgcggacagctcgggcattaccaagaaggaaaaggtg
acgctgaccggcgacgactgccgcgaaggcctgacggccgtgctgtcggtcaaggttccc
gatccgaaattctcgtcgcagaccaaggacaagctggtttcctccgaagttcgccccgtc
gtcgagagcctggtcaacgaagccctcagcacctggctcgaggaacatccgtccgaagcc
aaggttctggtcggcaaggtcgtcgaagccgctgccgcccgtgaagcggcccgcaaggcg
cgcgaactgacccgccgcaagggcgcgcttgatatcgcctcgctccccggcaagcttgcc
gactgctcagagcgtgatcccgccaagtccgaagtcttcctcgtcgagggcgactcggca
ggcggttcggccaagcagggccgttcgcgtgaaaaccaggccatcctgccgctgcgcggc
aagatcctgaacgtcgagcgcgctcgcttcgataagatgctgtccagccaggaaatcggc
acgctgatcaccgcgctcggcaccggcatcggcaaggacgaattcaacgccgaaaagctc
cgctatcacaagatcatcatcatgacggacgcagacgtcgacggcgcgcatattcgcacg
ttgctgctgaccttcttcttccggcagatgcccgatctcatcgagcgcggccatctctat
atcgcccagccgccgctctataaggtgacgcgtggcaagtcggtgcaatatgtcaaggac
gagaaggcgctggaagaatatctgatcggccagggcacggacgatgtgagcctgcgcctc
ggcaacggcgaagtccgtaccggtcaggatctgcgcgaggcgatctatgacgcgcttcgt
ctgcgcacgctgatcgacaatctgcattcccgctataatcgctctgtcgtcgagcaggcg
gcaattgcaggcgctctcaatgccgaaatggtcagcgatcccgcgcgtgcggaggcgctc
gtcaatgatgttgccaagcggctagatgtcatcgccgaggaaaccgagcgcggctggact
ggtgctgtgacgggcgagggcggcctgcgctttgagcgcaccgtacgcggcgtcaaggaa
gtcgtcttcctcgacatggcgctcatcggttcgcaggatgcccgccttatcgatcagctc
ggcgcgcggttgaaggaagtctatatcacaccgccaaagctcgttcgccgcgatggagag
acggagatttccggccctcgccagctgctggatacgatcttcgccggcggtcgcaagggg
ctgacgctgcagcgttataaaggtctcggcgaaatgaatgccgagcagctctgggaaacg
acgctcgacccgaacgtccgctcgctgctgcaggtgagggtcacggatgcgaccgatgca
gacggcctctttgcccggctcatgggcgatgaggtcgagccgcggcgtgagttcattcag
gacaacgcgctgaacgtcgccaatctcgacatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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